Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Probe Report: TraesCS1A01G260500

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	TraesCS1A01G260500
Locus	TraesCS1A01G260500.1
URL	[ Hide all but 1 of 26 ] Pfam PF02518 Pfam PF00204 Pfam PF01751 Pfam PF16898 Pfam PF00521 InterPro IPR001154 InterPro IPR001241 InterPro IPR002205 InterPro IPR003594 InterPro IPR006171 InterPro IPR013506 InterPro IPR013757 InterPro IPR013758 InterPro IPR013759 InterPro IPR013760 InterPro IPR014721 InterPro IPR018522 InterPro IPR020568 InterPro IPR024946 InterPro IPR031660 Gene Ontology GO:0003677 Gene Ontology GO:0003918 Gene Ontology GO:0005524 Gene Ontology GO:0006259 Gene Ontology GO:0006265 Gene expression at wheat-expression.com (expVIP)
Reference	IWGSC et al. (2018) Shifting the limits in wheat research and breeding using a fully annotated reference genome Science 361.
General Remarks	BLAST Hit Accession: tr|A0A1D5RQC7|A0A1D5RQC7_WHEAT Human Readable Description: DNA topoisomerase 2 Pfam IDs Description: PF02518: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; PF00204: DNA gyrase B; PF01751: Toprim domain; PF16898: C-terminal associated domain of TOPRIM; PF00521: DNA gyrase/topoisomerase IV, subunit A InterPro IDs Description: IPR001154: DNA topoisomerase II, eukaryotic-type; IPR001241: DNA topoisomerase, type IIA; IPR002205: DNA topoisomerase, type IIA, subunit A/C-terminal; IPR003594: Histidine kinase-like ATPase, C-terminal domain; IPR006171: TOPRIM domain; IPR013506: DNA topoisomerase, type IIA, subunit B, domain 2; IPR013757: Type IIA DNA topoisomerase subunit A, alpha-helical domain; IPR013758: DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta; IPR013759: DNA topoisomerase, type IIA, central domain; IPR013760: DNA topoisomerase, type IIA-like domain; IPR014721: Ribosomal protein S5 domain 2-type fold, subgroup; IPR018522: DNA topoisomerase, type IIA, conserved site; IPR020568: Ribosomal protein S5 domain 2-type fold; IPR024946: Arginine repressor C-terminal-like domain; IPR031660: C-terminal associated domain of TOPRIM GO IDs Description via InterPro: GO:0003677 MF: DNA binding; GO:0003918 MF: DNA topoisomerase type II (ATP-hydrolyzing) activity; GO:0005524 MF: ATP binding; GO:0006259 BP: DNA metabolic process; GO:0006265 BP: DNA topological change
Type	Genomic
Sequence	TraesCS1A01G260500.1 TraesCS1A01G260500.2
Source Species	Triticum aestivum
Source Germplasm	Chinese Spring