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GrainGenes Probe Report: TraesCS1D01G089500

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	TraesCS1D01G089500
Locus	TraesCS1D01G089500.1
URL	[ Hide all but 1 of 21 ] Pfam PF06733 Pfam PF06777 Pfam PF13307 InterPro IPR001945 InterPro IPR006554 InterPro IPR006555 InterPro IPR010614 InterPro IPR010643 InterPro IPR013020 InterPro IPR014013 InterPro IPR027417 Gene Ontology GO:0003676 Gene Ontology GO:0003677 Gene Ontology GO:0004003 Gene Ontology GO:0005524 Gene Ontology GO:0005634 Gene Ontology GO:0006139 Gene Ontology GO:0006289 Gene Ontology GO:0008026 Gene Ontology GO:0016818 Gene expression at wheat-expression.com (expVIP)
Reference	IWGSC et al. (2018) Shifting the limits in wheat research and breeding using a fully annotated reference genome Science 361.
General Remarks	BLAST Hit Accession: tr|I0Z847|I0Z847_COCSC Human Readable Description: DNA repair helicase Pfam IDs Description: PF06733: DEAD_2; PF06777: Helical and beta-bridge domain; PF13307: Helicase C-terminal domain InterPro IDs Description: IPR001945: RAD3/XPD family; IPR006554: Helicase-like, DEXD box c2 type; IPR006555: ATP-dependent helicase, C-terminal; IPR010614: DEAD2; IPR010643: Helical and beta-bridge domain; IPR013020: DNA helicase (DNA repair), Rad3 type; IPR014013: Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-type; IPR027417: P-loop containing nucleoside triphosphate hydrolase GO IDs Description via InterPro: GO:0003676 MF: nucleic acid binding; GO:0003677 MF: DNA binding; GO:0004003 MF: ATP-dependent DNA helicase activity; GO:0005524 MF: ATP binding; GO:0005634 CC: nucleus; GO:0006139 BP: nucleobase-containing compound metabolic process; GO:0006289 BP: nucleotide-excision repair; GO:0008026 MF: ATP-dependent helicase activity; GO:0016818 MF: hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
Type	Genomic
Sequence	TraesCS1D01G089500.1
Source Species	Triticum aestivum
Source Germplasm	Chinese Spring