Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Probe Report: TraesCS1D01G161700

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	TraesCS1D01G161700
Locus	TraesCS1D01G161700.1
URL	[ Hide all but 1 of 21 ] Pfam PF01751 Pfam PF01131 Pfam PF01396 Pfam PF13368 InterPro IPR003601 InterPro IPR003602 InterPro IPR005733 InterPro IPR006171 InterPro IPR013497 InterPro IPR013498 InterPro IPR013825 InterPro IPR023405 InterPro IPR023406 InterPro IPR025589 InterPro IPR028612 Gene Ontology GO:0003677 Gene Ontology GO:0003916 Gene Ontology GO:0003917 Gene Ontology GO:0005694 Gene Ontology GO:0006265 Gene expression at wheat-expression.com (expVIP)
Reference	IWGSC et al. (2018) Shifting the limits in wheat research and breeding using a fully annotated reference genome Science 361.
General Remarks	BLAST Hit Accession: tr|C3SA84|C3SA84_BRADI Human Readable Description: DNA topoisomerase family Pfam IDs Description: PF01751: Toprim domain; PF01131: DNA topoisomerase; PF01396: Topoisomerase DNA binding C4 zinc finger; PF13368: Topoisomerase C-terminal repeat InterPro IDs Description: IPR003601: DNA topoisomerase, type IA, domain 2; IPR003602: DNA topoisomerase, type IA, DNA-binding domain; IPR005733: DNA topoisomerase I, bacterial-type; IPR006171: TOPRIM domain; IPR013497: DNA topoisomerase, type IA, central; IPR013498: DNA topoisomerase, type IA, zn finger; IPR013825: DNA topoisomerase, type IA, central region, subdomain 2; IPR023405: DNA topoisomerase, type IA, core domain; IPR023406: DNA topoisomerase, type IA, active site; IPR025589: Topoisomerase C-terminal repeat; IPR028612: DNA topoisomerase I, type IA GO IDs Description via InterPro: GO:0003677 MF: DNA binding; GO:0003916 MF: DNA topoisomerase activity; GO:0003917 MF: DNA topoisomerase type I activity; GO:0005694 CC: chromosome; GO:0006265 BP: DNA topological change
Type	Genomic
Sequence	TraesCS1D01G161700.1
Source Species	Triticum aestivum
Source Germplasm	Chinese Spring