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GrainGenes Probe Report: TraesCS1D01G409700

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Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.


Probe
TraesCS1D01G409700
Locus
TraesCS1D01G409700.1
URL
[ Hide all but 1 of 16 ]
Pfam PF01782
Pfam PF05239
Pfam PF01704
InterPro IPR002618
InterPro IPR002676
InterPro IPR009000
InterPro IPR011033
InterPro IPR011961
InterPro IPR027275
InterPro IPR029044
Gene Ontology GO:0005840
Gene Ontology GO:0006364
Gene Ontology GO:0008152
Gene Ontology GO:0043022
Gene Ontology GO:0070569
Gene expression at wheat-expression.com (expVIP)
Reference
ReferenceIWGSC et al. (2018) Shifting the limits in wheat research and breeding using a fully annotated reference genome Science 361.
General Remarks
BLAST Hit Accession: tr|N1QS51|N1QS51_AEGTA
Human Readable Description: Ribosome maturation factor rimM
Pfam IDs Description: PF01782: RimM N-terminal domain; PF05239: PRC-barrel domain; PF01704: UTP--glucose-1-phosphate uridylyltransferase
InterPro IDs Description: IPR002618: UDPGP family; IPR002676: RimM protein; IPR009000: Translation protein, beta-barrel domain; IPR011033: PRC-barrel-like; IPR011961: 16S rRNA processing protein RimM; IPR027275: PRC-barrel domain; IPR029044: Nucleotide-diphospho-sugar transferases
GO IDs Description via InterPro: GO:0005840 CC: ribosome; GO:0006364 BP: rRNA processing; GO:0008152 BP: metabolic process; GO:0043022 MF: ribosome binding; GO:0070569 MF: uridylyltransferase activity
Type
Genomic
Sequence
TraesCS1D01G409700.1
Source Species
Triticum aestivum
Source Germplasm
Chinese Spring