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GrainGenes Probe Report: TraesCS3A01G408500

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	TraesCS3A01G408500
Locus	TraesCS3A01G408500.1
URL	[ Hide all but 1 of 20 ] Pfam PF00176 Pfam PF00271 InterPro IPR000330 InterPro IPR000953 InterPro IPR001650 InterPro IPR001841 InterPro IPR001965 InterPro IPR002464 InterPro IPR013083 InterPro IPR014001 InterPro IPR016197 InterPro IPR019786 InterPro IPR019787 InterPro IPR027417 Gene Ontology GO:0003676 Gene Ontology GO:0005515 Gene Ontology GO:0005524 Gene Ontology GO:0008026 Gene Ontology GO:0008270 Gene expression at wheat-expression.com (expVIP)
Reference	IWGSC et al. (2018) Shifting the limits in wheat research and breeding using a fully annotated reference genome Science 361.
General Remarks	BLAST Hit Accession: AT5G22750.1 Human Readable Description: DNA/RNA helicase protein Pfam IDs Description: PF00176: SNF2 family N-terminal domain; PF00271: Helicase conserved C-terminal domain InterPro IDs Description: IPR000330: SNF2-related, N-terminal domain; IPR000953: Chromo/chromo shadow domain; IPR001650: Helicase, C-terminal; IPR001841: Zinc finger, RING-type; IPR001965: Zinc finger, PHD-type; IPR002464: DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site; IPR013083: Zinc finger, RING/FYVE/PHD-type; IPR014001: Helicase superfamily 1/2, ATP-binding domain; IPR016197: Chromo domain-like; IPR019786: Zinc finger, PHD-type, conserved site; IPR019787: Zinc finger, PHD-finger; IPR027417: P-loop containing nucleoside triphosphate hydrolase GO IDs Description via InterPro: GO:0003676 MF: nucleic acid binding; GO:0005515 MF: protein binding; GO:0005524 MF: ATP binding; GO:0008026 MF: ATP-dependent helicase activity; GO:0008270 MF: zinc ion binding
Type	Genomic
Sequence	TraesCS3A01G408500.1 TraesCS3A01G408500.2
Source Species	Triticum aestivum
Source Germplasm	Chinese Spring