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GrainGenes Probe Report: TraesCS3D01G113800

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	TraesCS3D01G113800
Locus	TraesCS3D01G113800.1
URL	[ Hide all but 1 of 26 ] Pfam PF04558 Pfam PF04557 Pfam PF00749 Pfam PF03950 InterPro IPR000924 InterPro IPR001412 InterPro IPR004514 InterPro IPR007638 InterPro IPR007639 InterPro IPR011035 InterPro IPR014729 InterPro IPR020056 InterPro IPR020058 InterPro IPR020059 InterPro IPR020061 Gene Ontology GO:0000166 Gene Ontology GO:0004812 Gene Ontology GO:0004819 Gene Ontology GO:0005524 Gene Ontology GO:0005737 Gene Ontology GO:0006412 Gene Ontology GO:0006418 Gene Ontology GO:0006425 Gene Ontology GO:0016876 Gene Ontology GO:0043039 Gene expression at wheat-expression.com (expVIP)
Reference	IWGSC et al. (2018) Shifting the limits in wheat research and breeding using a fully annotated reference genome Science 361.
General Remarks	BLAST Hit Accession: tr|A0A1E5VK25|A0A1E5VK25_9POAL Human Readable Description: Glutamine--tRNA ligase Pfam IDs Description: PF04558: Glutaminyl-tRNA synthetase, non-specific RNA binding region part 1; PF04557: Glutaminyl-tRNA synthetase, non-specific RNA binding region part 2; PF00749: tRNA synthetases class I (E and Q), catalytic domain; PF03950: tRNA synthetases class I (E and Q), anti-codon binding domain InterPro IDs Description: IPR000924: Glutamyl/glutaminyl-tRNA synthetase; IPR001412: Aminoacyl-tRNA synthetase, class I, conserved site; IPR004514: Glutamine-tRNA synthetase; IPR007638: Glutaminyl-tRNA synthetase, class Ib, non-specific RNA-binding domain 2; IPR007639: Glutaminyl-tRNA synthetase, class Ib, non-specific RNA-binding domain, N-terminal; IPR011035: Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain; IPR014729: Rossmann-like alpha/beta/alpha sandwich fold; IPR020056: Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain; IPR020058: Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain; IPR020059: Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain; IPR020061: Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO IDs Description via InterPro: GO:0000166 MF: nucleotide binding; GO:0004812 MF: aminoacyl-tRNA ligase activity; GO:0004819 MF: glutamine-tRNA ligase activity; GO:0005524 MF: ATP binding; GO:0005737 CC: cytoplasm; GO:0006412 BP: translation; GO:0006418 BP: tRNA aminoacylation for protein translation; GO:0006425 BP: glutaminyl-tRNA aminoacylation; GO:0016876 MF: ligase activity, forming aminoacyl-tRNA and related compounds; GO:0043039 BP: tRNA aminoacylation
Type	Genomic
Sequence	TraesCS3D01G113800.1
Source Species	Triticum aestivum
Source Germplasm	Chinese Spring