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GrainGenes Probe Report: TraesCS3D01G190200

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	TraesCS3D01G190200
Locus	TraesCS3D01G190200.1
URL	[ Hide all but 1 of 23 ] Pfam PF00749 Pfam PF03950 InterPro IPR000924 InterPro IPR001412 InterPro IPR004526 InterPro IPR010987 InterPro IPR011035 InterPro IPR014729 InterPro IPR020056 InterPro IPR020058 InterPro IPR020059 InterPro IPR020061 Gene Ontology GO:0000166 Gene Ontology GO:0004812 Gene Ontology GO:0004818 Gene Ontology GO:0005524 Gene Ontology GO:0005737 Gene Ontology GO:0006412 Gene Ontology GO:0006418 Gene Ontology GO:0006424 Gene Ontology GO:0016876 Gene Ontology GO:0043039 Gene expression at wheat-expression.com (expVIP)
Reference	IWGSC et al. (2018) Shifting the limits in wheat research and breeding using a fully annotated reference genome Science 361.
General Remarks	BLAST Hit Accession: tr|A0A0K9P241|A0A0K9P241_ZOSMR Human Readable Description: Glutamate--tRNA ligase Pfam IDs Description: PF00749: tRNA synthetases class I (E and Q), catalytic domain; PF03950: tRNA synthetases class I (E and Q), anti-codon binding domain InterPro IDs Description: IPR000924: Glutamyl/glutaminyl-tRNA synthetase; IPR001412: Aminoacyl-tRNA synthetase, class I, conserved site; IPR004526: Glutamyl-tRNA synthetase, archaeal/eukaryotic cytosolic; IPR010987: Glutathione S-transferase, C-terminal-like; IPR011035: Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain; IPR014729: Rossmann-like alpha/beta/alpha sandwich fold; IPR020056: Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain; IPR020058: Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain; IPR020059: Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain; IPR020061: Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO IDs Description via InterPro: GO:0000166 MF: nucleotide binding; GO:0004812 MF: aminoacyl-tRNA ligase activity; GO:0004818 MF: glutamate-tRNA ligase activity; GO:0005524 MF: ATP binding; GO:0005737 CC: cytoplasm; GO:0006412 BP: translation; GO:0006418 BP: tRNA aminoacylation for protein translation; GO:0006424 BP: glutamyl-tRNA aminoacylation; GO:0016876 MF: ligase activity, forming aminoacyl-tRNA and related compounds; GO:0043039 BP: tRNA aminoacylation
Type	Genomic
Sequence	TraesCS3D01G190200.1
Source Species	Triticum aestivum
Source Germplasm	Chinese Spring