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GrainGenes Probe Report: TraesCS3D01G403600

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	TraesCS3D01G403600
Locus	TraesCS3D01G403600.1
URL	[ Hide all but 1 of 19 ] Pfam PF00176 Pfam PF00271 InterPro IPR000330 InterPro IPR001650 InterPro IPR001841 InterPro IPR001965 InterPro IPR002464 InterPro IPR013083 InterPro IPR014001 InterPro IPR016197 InterPro IPR019786 InterPro IPR019787 InterPro IPR027417 Gene Ontology GO:0003676 Gene Ontology GO:0005515 Gene Ontology GO:0005524 Gene Ontology GO:0008026 Gene Ontology GO:0008270 Gene expression at wheat-expression.com (expVIP)
Reference	IWGSC et al. (2018) Shifting the limits in wheat research and breeding using a fully annotated reference genome Science 361.
General Remarks	BLAST Hit Accession: AT5G22750.1 Human Readable Description: DNA/RNA helicase protein Pfam IDs Description: PF00176: SNF2 family N-terminal domain; PF00271: Helicase conserved C-terminal domain InterPro IDs Description: IPR000330: SNF2-related, N-terminal domain; IPR001650: Helicase, C-terminal; IPR001841: Zinc finger, RING-type; IPR001965: Zinc finger, PHD-type; IPR002464: DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site; IPR013083: Zinc finger, RING/FYVE/PHD-type; IPR014001: Helicase superfamily 1/2, ATP-binding domain; IPR016197: Chromo domain-like; IPR019786: Zinc finger, PHD-type, conserved site; IPR019787: Zinc finger, PHD-finger; IPR027417: P-loop containing nucleoside triphosphate hydrolase GO IDs Description via InterPro: GO:0003676 MF: nucleic acid binding; GO:0005515 MF: protein binding; GO:0005524 MF: ATP binding; GO:0008026 MF: ATP-dependent helicase activity; GO:0008270 MF: zinc ion binding
Type	Genomic
Sequence	TraesCS3D01G403600.1
Source Species	Triticum aestivum
Source Germplasm	Chinese Spring