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GrainGenes Probe Report: TraesCS4D01G133500

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	TraesCS4D01G133500
Locus	TraesCS4D01G133500.1
URL	[ Hide all but 1 of 23 ] Pfam PF00270 Pfam PF00271 Pfam PF16124 Pfam PF09382 Pfam PF00570 InterPro IPR001650 InterPro IPR002121 InterPro IPR004589 InterPro IPR011545 InterPro IPR011991 InterPro IPR014001 InterPro IPR018982 InterPro IPR027417 InterPro IPR032284 Gene Ontology GO:0003676 Gene Ontology GO:0005524 Gene Ontology GO:0005622 Gene Ontology GO:0006260 Gene Ontology GO:0006281 Gene Ontology GO:0006310 Gene Ontology GO:0008026 Gene Ontology GO:0043140 Gene expression at wheat-expression.com (expVIP)
Reference	IWGSC et al. (2018) Shifting the limits in wheat research and breeding using a fully annotated reference genome Science 361.
General Remarks	BLAST Hit Accession: sp|P57453|DEAD_BUCAI Human Readable Description: ATP-dependent RNA helicase DeaD Pfam IDs Description: PF00270: DEAD/DEAH box helicase; PF00271: Helicase conserved C-terminal domain; PF16124: RecQ zinc-binding; PF09382: RQC domain; PF00570: HRDC domain InterPro IDs Description: IPR001650: Helicase, C-terminal; IPR002121: HRDC domain; IPR004589: DNA helicase, ATP-dependent, RecQ type; IPR011545: DEAD/DEAH box helicase domain; IPR011991: Winged helix-turn-helix DNA-binding domain; IPR014001: Helicase superfamily 1/2, ATP-binding domain; IPR018982: RQC domain; IPR027417: P-loop containing nucleoside triphosphate hydrolase; IPR032284: ATP-dependent DNA helicase RecQ, zinc-binding domain GO IDs Description via InterPro: GO:0003676 MF: nucleic acid binding; GO:0005524 MF: ATP binding; GO:0005622 CC: intracellular; GO:0006260 BP: DNA replication; GO:0006281 BP: DNA repair; GO:0006310 BP: DNA recombination; GO:0008026 MF: ATP-dependent helicase activity; GO:0043140 MF: ATP-dependent 3'-5' DNA helicase activity
Type	Genomic
Sequence	TraesCS4D01G133500.1
Source Species	Triticum aestivum
Source Germplasm	Chinese Spring