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GrainGenes Probe Report: TraesCS4D01G342300

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	TraesCS4D01G342300
Locus	TraesCS4D01G342300.1
URL	[ Hide all but 1 of 25 ] Pfam PF04851 Pfam PF00271 Pfam PF03368 Pfam PF02170 Pfam PF00636 Pfam PF14709 InterPro IPR000999 InterPro IPR001650 InterPro IPR003100 InterPro IPR005034 InterPro IPR006935 InterPro IPR011907 InterPro IPR014001 InterPro IPR014720 InterPro IPR027417 Gene Ontology GO:0003677 Gene Ontology GO:0003723 Gene Ontology GO:0004525 Gene Ontology GO:0005515 Gene Ontology GO:0005524 Gene Ontology GO:0006396 Gene Ontology GO:0016075 Gene Ontology GO:0016787 Gene Ontology GO:0016891 Gene expression at wheat-expression.com (expVIP)
Reference	IWGSC et al. (2018) Shifting the limits in wheat research and breeding using a fully annotated reference genome Science 361.
General Remarks	BLAST Hit Accession: tr|A0A1J3J3H8|A0A1J3J3H8_NOCCA Human Readable Description: Endoribonuclease Dicer-like protein 3 Pfam IDs Description: PF04851: Type III restriction enzyme, res subunit; PF00271: Helicase conserved C-terminal domain; PF03368: Dicer dimerisation domain; PF02170: PAZ domain; PF00636: Ribonuclease III domain; PF14709: double strand RNA binding domain from DEAD END PROTEIN 1 InterPro IDs Description: IPR000999: Ribonuclease III domain; IPR001650: Helicase, C-terminal; IPR003100: PAZ domain; IPR005034: Dicer dimerisation domain; IPR006935: Helicase/UvrB, N-terminal; IPR011907: Ribonuclease III; IPR014001: Helicase superfamily 1/2, ATP-binding domain; IPR014720: Double-stranded RNA-binding domain; IPR027417: P-loop containing nucleoside triphosphate hydrolase GO IDs Description via InterPro: GO:0003677 MF: DNA binding; GO:0003723 MF: RNA binding; GO:0004525 MF: ribonuclease III activity; GO:0005515 MF: protein binding; GO:0005524 MF: ATP binding; GO:0006396 BP: RNA processing; GO:0016075 BP: rRNA catabolic process; GO:0016787 MF: hydrolase activity; GO:0016891 MF: endoribonuclease activity, producing 5'-phosphomonoesters
Type	Genomic
Sequence	TraesCS4D01G342300.1 TraesCS4D01G342300.2 TraesCS4D01G342300.3
Source Species	Triticum aestivum
Source Germplasm	Chinese Spring