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GrainGenes Probe Report: TraesCS7A01G566000

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	TraesCS7A01G566000
Locus	TraesCS7A01G566000.1
URL	[ Hide all but 1 of 22 ] Pfam PF02375 Pfam PF01388 Pfam PF00628 Pfam PF02373 Pfam PF02928 Pfam PF08429 InterPro IPR001606 InterPro IPR001965 InterPro IPR003347 InterPro IPR003349 InterPro IPR004198 InterPro IPR011011 InterPro IPR013083 InterPro IPR013637 InterPro IPR019786 InterPro IPR019787 Gene Ontology GO:0003677 Gene Ontology GO:0005515 Gene Ontology GO:0008270 Gene Ontology GO:0016706 Gene Ontology GO:0055114 Gene expression at wheat-expression.com (expVIP)
Reference	IWGSC et al. (2018) Shifting the limits in wheat research and breeding using a fully annotated reference genome Science 361.
General Remarks	BLAST Hit Accession: tr|A0A199VDI0|A0A199VDI0_ANACO Human Readable Description: Lysine-specific demethylase Pfam IDs Description: PF02375: jmjN domain; PF01388: ARID/BRIGHT DNA binding domain; PF00628: PHD-finger; PF02373: JmjC domain, hydroxylase; PF02928: C5HC2 zinc finger; PF08429: PLU-1-like protein InterPro IDs Description: IPR001606: ARID DNA-binding domain; IPR001965: Zinc finger, PHD-type; IPR003347: JmjC domain; IPR003349: JmjN domain; IPR004198: Zinc finger, C5HC2-type; IPR011011: Zinc finger, FYVE/PHD-type; IPR013083: Zinc finger, RING/FYVE/PHD-type; IPR013637: Lysine-specific demethylase-like domain; IPR019786: Zinc finger, PHD-type, conserved site; IPR019787: Zinc finger, PHD-finger GO IDs Description via InterPro: GO:0003677 MF: DNA binding; GO:0005515 MF: protein binding; GO:0008270 MF: zinc ion binding; GO:0016706 MF: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors; GO:0055114 BP: oxidation-reduction process
Type	Genomic
Sequence	TraesCS7A01G566000.1
Source Species	Triticum aestivum
Source Germplasm	Chinese Spring