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GrainGenes Probe Report: TraesCS7B01G050100

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	TraesCS7B01G050100
Locus	TraesCS7B01G050100.3
URL	[ Hide all but 1 of 22 ] Pfam PF00385 Pfam PF00176 Pfam PF00271 Pfam PF06465 Pfam PF06461 InterPro IPR000330 InterPro IPR000953 InterPro IPR001650 InterPro IPR001965 InterPro IPR009462 InterPro IPR009463 InterPro IPR013083 InterPro IPR014001 InterPro IPR016197 InterPro IPR019786 InterPro IPR019787 InterPro IPR023780 InterPro IPR027417 Gene Ontology GO:0005515 Gene Ontology GO:0005524 Gene Ontology GO:0008270 Gene expression at wheat-expression.com (expVIP)
Reference	IWGSC et al. (2018) Shifting the limits in wheat research and breeding using a fully annotated reference genome Science 361.
General Remarks	BLAST Hit Accession: tr|Q5SML0|Q5SML0_ORYSJ Human Readable Description: Chromatin-remodeling factor CHD3 Pfam IDs Description: PF00385: Chromo (CHRromatin Organisation MOdifier) domain; PF00176: SNF2 family N-terminal domain; PF00271: Helicase conserved C-terminal domain; PF06465: Domain of Unknown Function (DUF1087); PF06461: Domain of Unknown Function (DUF1086) InterPro IDs Description: IPR000330: SNF2-related, N-terminal domain; IPR000953: Chromo/chromo shadow domain; IPR001650: Helicase, C-terminal; IPR001965: Zinc finger, PHD-type; IPR009462: Domain of unknown function DUF1086; IPR009463: Domain of unknown function DUF1087; IPR013083: Zinc finger, RING/FYVE/PHD-type; IPR014001: Helicase superfamily 1/2, ATP-binding domain; IPR016197: Chromo domain-like; IPR019786: Zinc finger, PHD-type, conserved site; IPR019787: Zinc finger, PHD-finger; IPR023780: Chromo domain; IPR027417: P-loop containing nucleoside triphosphate hydrolase GO IDs Description via InterPro: GO:0005515 MF: protein binding; GO:0005524 MF: ATP binding; GO:0008270 MF: zinc ion binding
Type	Genomic
Sequence	TraesCS7B01G050100.1 [ Show all 6 ]
Source Species	Triticum aestivum
Source Germplasm	Chinese Spring