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GrainGenes Probe Report: TraesCS7D01G544800

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	TraesCS7D01G544800
Locus	TraesCS7D01G544800.1
URL	[ Hide all but 1 of 15 ] Pfam PF00628 Pfam PF02373 Pfam PF08429 InterPro IPR001965 InterPro IPR003347 InterPro IPR011011 InterPro IPR013083 InterPro IPR013637 InterPro IPR019786 InterPro IPR019787 Gene Ontology GO:0005515 Gene Ontology GO:0008270 Gene Ontology GO:0016706 Gene Ontology GO:0055114 Gene expression at wheat-expression.com (expVIP)
Reference	IWGSC et al. (2018) Shifting the limits in wheat research and breeding using a fully annotated reference genome Science 361.
General Remarks	BLAST Hit Accession: tr|A0A199VDI0|A0A199VDI0_ANACO Human Readable Description: Lysine-specific demethylase Pfam IDs Description: PF00628: PHD-finger; PF02373: JmjC domain, hydroxylase; PF08429: PLU-1-like protein InterPro IDs Description: IPR001965: Zinc finger, PHD-type; IPR003347: JmjC domain; IPR011011: Zinc finger, FYVE/PHD-type; IPR013083: Zinc finger, RING/FYVE/PHD-type; IPR013637: Lysine-specific demethylase-like domain; IPR019786: Zinc finger, PHD-type, conserved site; IPR019787: Zinc finger, PHD-finger GO IDs Description via InterPro: GO:0005515 MF: protein binding; GO:0008270 MF: zinc ion binding; GO:0016706 MF: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors; GO:0055114 BP: oxidation-reduction process
Type	Genomic
Sequence	TraesCS7D01G544800.1 TraesCS7D01G544800.2
Source Species	Triticum aestivum
Source Germplasm	Chinese Spring