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GrainGenes Trait Study Report: Agromorphology and grain quality, Spanish tetraploid landraces, Giraldo2016

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Trait Study	Agromorphology and grain quality, Spanish tetraploid landraces, Giraldo2016
Reference	Giraldo P et al. (2016) Genetic Diversity and Association Mapping for Agromorphological and Grain Quality Traits of a Structured Collection of Durum Wheat Landraces Including subsp. durum, turgidum and diccocon PLoS One 11:e016657.
Ontology	[ Hide all but 1 of 13 ] TO:0000326 Planteome shoot system yield trait TO:0000207 Planteome plant height TO:0000431 Planteome ear length TO:0000456 Planteome spikelet number TO:0000589 Planteome average grain weight TO:0000612 Planteome grain density TO:0000469 Planteome days to maturity TO:0000137 Planteome days to heading TO:0000162 Planteome grain quality trait TO:0000598 Planteome protein content CO_321:0000037 Planteome wheat grain color trait CO_321:0000400 Planteome wheat minolta chroma meter test method CO_321:0000055 Planteome wheat spike density trait
Population Size	183
Population Type	A collection of Triticum turgidum ssp. durum, ssp. turgidum, and ssp. dicoccon landraces from Spain.
Markers Tested	749
QTLs Found	67
Comment	Curator Note (VCB, 04/2019). QTL names and markers associated with QTL in this traitstudy are from two sources, the primary reference and information embedded in the QTL track of the GrainGenes genome browser for the Triticum turgidum ssp. durum cv. Svevo (RefSeq 1.0) assembly. QTL were initially curated by members of the International Durum Genome Sequencing Consortium who assigned the encoded QTL name and information on the assembly including computationally-aligned significant markers (SNPs, DArTs, SSRs). To curate these QTL for GrainGenes, the primary reference was reviewed, the original QTL name was synonymized, and original markers were added to the significant marker list shown on the QTL report page. GrainGenes users are advised to review the qtl track in the Svevo assembly for additional position information and confidence intervals, as well as the primary reference for additional statistics.
QTL	QGc.SpanishDurum-3B [ Show all 51 ]

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