An update of the hexaploid Oat consensus map set containing 99,846 markers was added to GrainGenes. Working closely with Nick Tinker and Charlene Wight at Agriculture and Agri-Food Canada (AAFC), a Google doc was created for collaboration and all markers were carefully curated, including 93,560 avgbs (Avena GBS) markers. A review of legacy markers in this project (RFLP, SSR, SNP, genes) initiated a massive locus reconciliation project for GrainGenes that resulted in the update of over 100,000 additional markers.
These maps were originally published in Bekele, et al. (2018) Haplotype based genotyping-by-sequencing in oat genome research. Plant Biotechnology Journal. 12888
Data for the 2018 Oat Consensus map is in GrainGenes at /cgi-bin/GG3/report.cgi?class=mapdata;query=oat*;name=Oat-2018-Consensus