Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Locus Report: avgbs2_153634.1.45

[Submit comment/correction][What is a locus?] A genetic locus is a specific position on a chromosome where a gene or genetic marker is located.

Type	KASP SNP
Probe	avgbs2_153634.1 avgbs2_153634.1.45_kom406
Map	Oat-2018-Consensus_Mrg20 252.5 Oat-2020-Pc98xBin_Mrg20 13.6 Oat-2020-Pc98xKas_Mrg20 11.6
	[ Show Nearby Loci ]
Map Data	Oat-2018-Consensus Oat-2020-Pc98
Species	Avena sativa
Reference	Zhao J et al. (2020) Chromosomal location of the crown rust resistance gene Pc98 in cultivated oat (Avena sativa L.) Theoretical and Applied Genetics 133:1109-1122. Bekele WA et al. (2018) Haplotype based genotyping-by-sequencing in oat genome research Plant Biotechnology Journal.
Remark	Curator note on the avgbs SNPs: Legacy GBS loci have the 'avgbs' prefix followed by a number with no decimals. Haplotag loci have either a single decimal (for TL-haplotype loci) or two decimals (for SNP loci, where the second decimal identifies the SNP position). All variations of this locus will be linked to the Probe record.

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.