Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Locus Report: POPA1_1294

[Submit comment/correction][What is a locus?] A genetic locus is a specific position on a chromosome where a gene or genetic marker is located.

Locus	POPA1_1294  [ Marker Report ]
Type	SNP
Probe	HAR35_5417 i_11_11294
Synonym	Other name 11_11294 BOPA1_11_11294 BOPA1_ABC12239-1-1-316 Synonym 11_11294
Chromosome	6H
Chromosome Arm	6HL
Map	Hordeum-OPA-2009-6H 93.66 Hordeum-OPA123-2008-6H 93.66 Hordeum-OPAConsensus-2011-6H 105.05
	[ Show Nearby Loci ]
Map Data	Barley, OPA 2009, Consensus Barley, OPA 2011, Consensus Barley, OPA123-2008, Consensus
Species	Hordeum vulgare
Sequence	HVVMRXALLhA0236N08
Reference	Comadran J et al. (2012) Natural variation in a homolog of Antirrhinum CENTRORADIALIS contributed to spring growth habit and environmental adaptation in cultivated barley Nature Genetics 44:1388-1392. Close TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
Data Source	Close, Timothy J.
Remark	Marker name in barley Pilot OPA1 = 1_1294 [ Show all 11 ]

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.