Query (optional)   in Class  

GrainGenes Marker Report: ABC155

[Submit comment/correction]

Locus
ABC155
Type
RFLP
STS
Chromosome
5 (1H)
5H
Chromosome Arm
5HL
Map
Barley-Consensus-5H86.8
[ Show all 12 ]
[ Show Nearby Loci ]
Map Data
Barley consensus
[ Show all 14 ]
Probe
ABC155
Reference
ReferenceWenzl P et al. (2006) A high-density consensus map of barley linking DArT markers to SSR, RFLP and STS loci and agricultural traits BMC Genomics 7:206.
ReferenceRodriguez M et al. (2006) Integration of retrotransposons-based markers in a linkage map of barley. Molecular Breeding 17:173-184.
ReferenceRostoks N et al. (2005) Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Molecular Genetics and Genomics 274:515-527.
Remark
Number of populations contributing to the placement of ABC155 in the Barley, Consensus 2006 DArT maps = 1
Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb'
Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = Steptoe x Morex
Loci in 'Barley, Consensus 2006, Marcel' mapped in population(s) : Steptoe x Morex
Possible Orthologs
Xabc155-1A
[ Show all 6 ]



Probe
ABC155
Locus
ABC155
[ Show all 7 ]
Synonym
SynonymHAR35_19975
HAR35_48990
External Databases
DDBJ
EMBL
GenBank
Remarks
Steptoe malt cDNA
Type
cDNA
STS
PCR primers
TCT GTG TGT TAT TCC TCT TA
ACG AAA AAT CAA TAC TGG TC
Sequence
L43926
ABC155
Linkage Group
Group 7
Source Species
Hordeum vulgare
Insert Size
0.5