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GrainGenes Marker Report: ABC156C

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Locus	ABC156C
Type	RFLP
Chromosome	3H
Map	Barley-Consensus2-3H 41 Hordeum-Bins-3H 62.7 Hordeum-StMo-SNP-3H 50 Hv-Consensus2006-Marcel-3H 51.62 Hv-Integrated2009-3H 63.4
	[ Show Nearby Loci ]
Map Data	Barley consensus 2 [ Show all 7 ]
Probe	ABC156
Reference	Rostoks N et al. (2005) Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Molecular Genetics and Genomics 274:515-527.
Remark	Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb' Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = Steptoe x Morex Loci in 'Barley, Consensus 2006, Marcel' mapped in population(s) : Steptoe x Morex
Possible Orthologs	ABC156 [ Show all 23 ]
Probe for Locus	ABC156
Locus	Sr33 [ Show all 25 ]
Synonym	Synonym HAR35_37808
General Remarks	Steptoe malt cDNA
Type	cDNA STS
STS primers	5' TTACGGGATCAAAGCTGAGGC 5' GACAAGCAACACCAACCAAGC
STS size	197
Amplification Conditions	STS annealing temperature 58-60 oC
Sequence	BQ548054 ABC156 ABC156-5
Polymorphism	ABC156 XbaI ABC156 EcoRI ABC156 EcoRV ABC156 HindIII ABC156 DraI
Linkage Group	Groups 2,3,1 2 3
Source Species	Hordeum vulgare
Source Germplasm	Steptoe (barley)
Source Tissue	malt
Insert Size	0.3