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GrainGenes Marker Report: ABC305

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Locus
ABC305
Type
RFLP
Synonym
SynonymABC305
Chromosome
7H
Chromosome Arm
7HL
Map
Barley-consensus-2003-7H126.5
[ Show all 24 ]
[ Show Nearby Loci ]
QTL with Locus Marker
MetaQ.FHB_7H_10
QFhs.umn-7H
Map Data
Barley consensus
[ Show all 24 ]
Species
Hordeum vulgare
Probe
ABC305
Reference
ReferenceClose TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
ReferenceVarshney RK et al. (2007) A high density barley microsatellite consensus map with 775 SSR loci. Theoretical and Applied Genetics 114:1091.
ReferenceRodriguez M et al. (2006) Integration of retrotransposons-based markers in a linkage map of barley. Molecular Breeding 17:173-184.
ReferenceRostoks N et al. (2005) Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Molecular Genetics and Genomics 274:515-527.
ReferenceMesfin A et al. (2003) Quantitative trait loci for fusarium head blight resistance in barley detected in a two-rowed by six-rowed population Crop Science 43:307-318.
Data Source
Blake, Tom05.04.19
Close, Timothy J.
Langridge, Peter J.
Remark
Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb'
Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = Steptoe x Morex
Loci in 'Barley, Consensus 2006, Marcel' mapped in population(s) : Steptoe x Morex
Locus in 'Barley, Consensus 2007, SSR' was a BIN marker in 'Barley, Consensus 2006, Marcel'
Possible Orthologs
ABC305-7H
ABC305a
ABC305B
Xabc305-5A
Xabc305-7A


Probe
ABC305
Locus
ABC305B
[ Show all 8 ]
External Databases
DDBJ
EMBL
GenBank
Remarks
Steptoe malt cDNA
Type
cDNA
STS
PCR primers
GAC AAC GGC CAA CAA ATC TA
AGC ATG TCA TTG AAC ACT TC
Sequence
L43945
ABC305
Linkage Group
Group 1
Source Species
Hordeum vulgare
Insert Size
0.8