Query (optional)   in Class  

GrainGenes Marker Report: ABC454

[Submit comment/correction]

Locus
ABC454
Type
RFLP
Synonym
SynonymABC454
Chromosome
2H
Chromosome Arm
2HS
Map
Barley-consensus-2003-2H52.7
[ Show all 17 ]
[ Show Nearby Loci ]
QTL with Locus Marker
QDon.dah-2H.1
QFhs.dah-2H.1
Map Data
Barley consensus
[ Show all 17 ]
Probe
ABC454
Reference
ReferenceWenzl P et al. (2006) A high-density consensus map of barley linking DArT markers to SSR, RFLP and STS loci and agricultural traits BMC Genomics 7:206.
ReferenceRostoks N et al. (2005) Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Molecular Genetics and Genomics 274:515-527.
Data Source
Blake, Tom05.04.19
Langridge, Peter J.
Remark
Number of populations contributing to the placement of ABC454 in the Barley, Consensus 2006 DArT maps = 1
Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb'
Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = Steptoe x Morex
Loci in 'Barley, Consensus 2006, Marcel' mapped in population(s) : Steptoe x Morex
Possible Orthologs
Xabc454u



Probe
ABC454
Locus
ABC454
Xabc454u
External Databases
DDBJ
EMBL
GenBank
Remarks
Steptoe leaf cDNA
Type
cDNA
STS
PCR primers
TTC ACA GCC GAA ACA CTT GT
GCG TGC GAG GGG AAG GAG AA
Sequence
L43953
ABC454
Linkage Group
2S
2
Source Species
Hordeum vulgare
Source Germplasm
Steptoe (barley)
Source Tissue
leaf
Insert Size
0.3