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GrainGenes Marker Report: ABG378

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Locus
ABG378
Type
RFLP
Chromosome
6H
Chromosome Arm
6HS
Map
Barley-Consensus-6H-47.2
[ Show all 17 ]
[ Show Nearby Loci ]
Map Data
Barley consensus
[ Show all 17 ]
Species
Hordeum vulgare
Probe
ABG378
Reference
ReferenceClose TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
ReferenceVarshney RK et al. (2007) A high density barley microsatellite consensus map with 775 SSR loci. Theoretical and Applied Genetics 114:1091.
ReferenceWenzl P et al. (2006) A high-density consensus map of barley linking DArT markers to SSR, RFLP and STS loci and agricultural traits BMC Genomics 7:206.
ReferenceRodriguez M et al. (2006) Integration of retrotransposons-based markers in a linkage map of barley. Molecular Breeding 17:173-184.
ReferenceChoi DW et al. (2000) Map locations of barley Dhn genes determined by gene-specific PCR Theoretical and Applied Genetics 101:350-354.
Data Source
Blake, Tom05.04.19
Remark
Number of populations contributing to the placement of ABG378 in the Barley, Consensus 2006 DArT maps = 1
Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb'
Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = Steptoe x Morex
Loci in 'Barley, Consensus 2006, Marcel' mapped in population(s) : Steptoe x Morex
Locus in 'Barley, Consensus 2007, SSR' was a BIN marker in 'Barley, Consensus 2006, Marcel'
Possible Orthologs
ABG378-6H
[ Show all 8 ]
Probe
ABG378
Locus
ABG378
[ Show all 9 ]
External Databases
DDBJ
EMBL
GenBank
Remarks
Shin Ebisu16 gDNA
Type
Genomic
STS
PCR primers
TTA GTC ATA GAA TCC CTG TT
AAA ATT CGC CTG TGC TGT GT
Sequence
L43985
ABG378
Linkage Group
Group6
Source Species
Hordeum vulgare
Insert Size
0.5