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GrainGenes Marker Report: ABG389

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Locus
ABG389
Type
RFLP
Synonym
SynonymPub (Hordeum)
Chromosome
3H
Chromosome Arm
3HL
Map
Barley-Consensus-3H62.5
[ Show all 12 ]
[ Show Nearby Loci ]
Map Data
Barley consensus
[ Show all 12 ]
Probe
ABG389
Associated Gene
Pub (Hordeum)
Gene Class
Pubescent leaf
Reference
ReferenceRostoks N et al. (2005) Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Molecular Genetics and Genomics 274:515-527.
ReferenceKleinhofs A et al. (1993) A molecular, isozyme and morphological map of the barley (Hordeum vulgare) genome Theoretical and Applied Genetics 86:705-712.
Data Source
Blake, Tom05.04.19
Remark
Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb'
Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = Steptoe x Morex,Igri x Franka
Loci in 'Barley, Consensus 2006, Marcel' mapped in population(s) : Steptoe x Morex; Igri x Franka
Possible Orthologs
Xabg389-3



Gene Associated with Locus
Pub (Hordeum)
Full Name
Pubescent leaf blade
Gene Class
Pubescent leaf
Allele
Pub (Hordeum)
pub (Hordeum)
Locus
ABG389
mPub
Pub
Reference
ReferenceKleinhofs A and Kilian A (1994) DNA based markers in plants. 1.
Chromosome
3H
Image
Barley, pub (hairless) phenotype
Barley, Pub (pubescent) phenotype
Info Source
Referencevon Wettstein-Knowles P (1993) Barley (Hordeum vulgare) 2N = 14. Genetic maps: Locus Maps of Complex Genomes.



Probe
ABG389
Locus
Xabg389-3
ABG389
Synonym
SynonymHAR35_9747
Reference
ReferenceKleinhofs A et al. (1993) A molecular, isozyme and morphological map of the barley (Hordeum vulgare) genome Theoretical and Applied Genetics 86:705-712.
Type
Genomic
Sequence
BH854355
ABG389-5
Linkage Group
3
Source Species
Hordeum vulgare
Source Germplasm
Shin Ebisu 16
Insert Size
0.4