GrainGenes Marker Report: ABG391
Locus
ABG391
Type
RFLP STS
Synonym
Synonym ABG391
Chromosome
5H
Chromosome Arm
5HL
Map
Barley-consensus-2003-5H 66.8
[ Show all 32 ]
[ Show Nearby Loci ]
QTL with Locus Marker
QMe.DiMo-5H.3
Map Data
Barley consensus
[ Show all 32 ]
Species
Hordeum vulgare
Probe
ABG391
Reference
Szucs P et al. (2009) An Integrated Resource for Barley Linkage Map and Malting Quality QTL Alignment The Plant Genome 2:134-140.
[ Show all 8 ]
Data Source
Blake, Tom 05.04.19 Langridge, Peter J.
Remark
Number of populations contributing to the placement of ABG391 in the Barley, Consensus 2006 DArT maps = 1 Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb' Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = Steptoe x Morex,Oregon Wolfe Barleys,Igri x Franka Loci in 'Barley, Consensus 2006, Marcel' mapped in population(s) : Steptoe x Morex; Oregon Wolfe Dom x Rec; Igri x Franka Locus in 'Barley, Consensus 2007, SSR' was a BIN marker in 'Barley, Consensus 2006, Marcel'
Possible Orthologs
ABG391-5H Xabg391 Xabg391-5A abg391 abg391-5A
Probe
ABG391
Locus
ABG391
[ Show all 6 ]
Synonym
Synonym HAR35_10560
External Databases
DDBJ EMBL GenBank
Type
Genomic STS
PCR primers
CGGTGAATTCCGTGCATTT
CATCAAACTCAATGCAAGTG
STS primers
5' GCAAGTGCACTGCTGTACAA
5' TGTTCTCGTACCATGACTTC
STS size
ca. 800
Amplification Conditions
STS annealing temperature 52-55 oC
Sequence
L43989 ABG391 ABG391-5 ABG391-3
Source Species
Hordeum vulgare
GrainGenes Marker Report: ABG391
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