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GrainGenes Marker Report: ABG466

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Locus	ABG466
Type	RFLP STS
Synonym	Synonym ABG466
Chromosome	6H
Chromosome Arm	6HS
Map	Barley-Consensus-6H -53.5 [ Show all 17 ]
	[ Show Nearby Loci ]
Map Data	Barley consensus [ Show all 17 ]
Species	Hordeum vulgare
Probe	ABG466
Reference	Rostoks N et al. (2005) Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Molecular Genetics and Genomics 274:515-527. Choi DW et al. (2000) Map locations of barley Dhn genes determined by gene-specific PCR Theoretical and Applied Genetics 101:350-354.
Data Source	Blake, Tom 05.04.19
Remark	Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb' Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = Steptoe x Morex,Igri x Franka Loci in 'Barley, Consensus 2006, Marcel' mapped in population(s) : Steptoe x Morex; Igri x Franka
Possible Orthologs	ABG466-6H [ Show all 6 ]
Probe	ABG466
Locus	ABG466 [ Show all 7 ]
Synonym	Synonym HAR35_18664
External Databases	DDBJ EMBL GenBank
Remarks	Shin Ebisu16 gDNA
Type	Genomic STS
PCR primers	TGC ACG CGC TGT GGC ATC TC CCA AGC ATT CCA ACC TTA GC
STS primers	5' GGAGGGAAGCGGCTGATAAT 5' CGTTGCAAATGGACGTGCCA
STS size	ca. 250
Amplification Conditions	STS annealing temperature 55-58 oC
Sequence	L44026 ABG466 ABG466-5
Linkage Group	6S
Source Species	Hordeum vulgare
Insert Size	0.5