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GrainGenes Marker Report: BCD1087

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Locus	bcd1087
Type	RFLP SNP
Synonym	Synonym POPA1_1523
Chromosome	5A 5B 5D
Map	Oat-2002-OxT-QTL_2 16 Oat-OxT-2 16.5 Rice-CU-9 33.6
	[ Show Nearby Loci ]
QTL with Locus Marker	QEFLD.2002-OxT_2 QLFLD.2002-OxT_2 QPHOTO.2002-OxT_2
Map Data	Oat, OxT Oat-2002-OxT-QTL Rice, BxOl Wheat chromosome arm map
Probe	BCD1087
Homology	CAA05145.2 e-value: 8e-15 (AJ002020) proton pump interactor [Arabidopsis thaliana]
Remark	The RFLP marker was advanced to the POPA1 SNP collection.
Possible Orthologs	BCD1087a [ Show all 6 ]
Probe	BCD1087
Locus	BCD1087a [ Show all 7 ]
Synonym	Synonym HAR35_853 HAR35_854
Reference	Heun M et al. (1991) Construction of a restriction fragment length polymorphism map for barley (Hordeum vulgare) Genome 34:437-447.
Remarks	Lambda ZAP II library Bar.LambZAPII [c]
Type	cDNA
Sequence	BE438650 BE438721 BE438814 BCD1087_WHE1G0101 BCD1087_WHE1G0102
Polymorphism	BCD1087 EcoRI
Linkage Group	5L
Insert Enzyme	EcoRI
Source Species	Hordeum vulgare
Source Germplasm	Willis
Source Tissue	etiolated leaf
Insert Size	0.8
PCR size	0.8