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GrainGenes Marker Report: BCD131

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Locus
bcd131
Type
RFLP
Synonym
Synonymbcd131
Chromosome
3H
Chromosome Arm
3HL
Map
Barley-Consensus-3H77.4
[ Show all 14 ]
[ Show Nearby Loci ]
Map Data
3B Physical
[ Show all 14 ]
Probe
BCD131
Homology
A34690e-value: 0.74DNA-binding protein inhibitor Id - mouse (fragment)
T23581e-value: 5.1hypothetical protein K10G4.5 - Caenorhabditis elegans domain: PF01827 (Domain of unknown function), Score=188.0, E-value=4.9e-53, N=4 [Caenorhabditis elegans]
Reference
ReferenceRostoks N et al. (2005) Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Molecular Genetics and Genomics 274:515-527.
Data Source
Blake, Tom05.04.19
Remark
Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb'
Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = Steptoe x Morex,Igri x Franka
Loci in 'Barley, Consensus 2006, Marcel' mapped in population(s) : Steptoe x Morex; Igri x Franka
Possible Orthologs
Xbcd131
[ Show all 8 ]



Probe
BCD131
Locus
bcd131
[ Show all 11 ]
Reference
ReferenceHeun M et al. (1991) Construction of a restriction fragment length polymorphism map for barley (Hordeum vulgare) Genome 34:437-447.
Remarks
Lambda ZAP II library
Bar.LambZAPII [c]
Bar.LambZAPII
Type
cDNA
Sequence
BE438613
[ Show all 6 ]
Polymorphism
BCD131 EcoRV
Linkage Group
[b 3L]
[b 3L]
3
Insert Enzyme
EcoRI
Source Species
Hordeum vulgare
Source Germplasm
Willis
Source Tissue
etiolated leaf
Insert Size
1
PCR size
1