GrainGenes Marker Report: BCD21
Locus
bcd21
Type
RFLP SNP
Synonym
Synonym POPA2_0294
Chromosome
5A 5B? 5D? 5H
Map
Hordeum-Consensus2006-DArT-5H 46.4 Hordeum-CxH-6H 19.02 Hordeum-CxS-5H 0 Physical-3B 120.93 Wheat, Yr genes and QTL 6A 5.1
[ Show Nearby Loci ]
Map Data
3B Physical
[ Show all 6 ]
Probe
BCD21
Homology
AAD12207.1 e-value: 2e-58 (AC006135) putative ubiquitin-conjugating enzyme E2 [Arabidopsis thaliana]
Reference
Wenzl P et al. (2006) A high-density consensus map of barley linking DArT markers to SSR, RFLP and STS loci and agricultural traits BMC Genomics 7:206.
Remark
Number of populations contributing to the placement of BCD21 in the Barley, Consensus 2006 DArT maps = 1 The RFLP marker was advanced to the POPA2 SNP collection.
Possible Orthologs
BCD21(A)
[ Show all 13 ]
Probe
BCD21
Locus
Xbcd21-6D
[ Show all 15 ]
Synonym
Synonym HAR35_970 HAR35_971 HAR35_972
Reference
Heun M et al. (1991) Construction of a restriction fragment length polymorphism map for barley (Hordeum vulgare) Genome 34:437-447.
Remarks
Lambda ZAP II library Bar.LambZAPII [c]
Type
cDNA
Sequence
BE438769 BCD21_WHE1F0052 BCD21_WHE1F0051
Polymorphism
Durums BCD21 EcoRI
Linkage Group
5L, 6S
Insert Enzyme
EcoRI
Source Species
Hordeum vulgare
Source Germplasm
Willis
Source Tissue
etiolated leaf
Insert Size
1
PCR size
1
GrainGenes Marker Report: BCD21
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