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GrainGenes Marker Report: Bmac156

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Locus
Bmac156
Type
Microsatellite
Chromosome
7H
Map
Barley-consensus-2003-7H159.9
Hv-HNxH602-7H282.5
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Map Data
Barley consensus 2003
Barley, HN x H602, Sato2009
Species
Hordeum vulgare
Hordeum vulgare subsp. spontaneum
Probe
Bmac156
Reference
ReferenceSato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Data Source
Langridge, Peter J.
Possible Orthologs
Bmac0156



Probe
Bmac156
Locus
Bmac0156
Bmac156
Synonym
Other nameBmac0156
Reference
ReferenceRamsay L et al. (2000) A simple sequence repeat-based linkage map of barley Genetics 156:1997-2005.
Remarks
Insert contains repeat (AC)22(AT)5
Quality = 3: Strong major polymorphic product, with additional strong bands. Multi-locus or weak but scoreable products
Diversity Index (DI) = 0.89
Type
PCR
SSR
PCR primers
5' AACCGAATGTATTCCTCTGTA 3'
5' GCCAAACAACTATCGTGTAC 3'
SSR size
139
Amplification Conditions
1 cycle of 1 min @ 94C, 1 min @ 55C, 1 min @ 72C, 30 cycles of 1 min @ 94C, 1 min @ 55C, 1 min @ 72C, 1 cycle of 5 mins @ 72C.
Source Species
Hordeum vulgare