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GrainGenes Marker Report: Bmac216

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Locus
Bmac216
Type
Microsatellite
Synonym
SynonymBmac0216
Chromosome
2H
Map
Hordeum-Consensus2006-DArT-2H92.1
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Map Data
Barley, Consensus 2006, DArT
Probe
Bmac216
Reference
ReferenceWenzl P et al. (2006) A high-density consensus map of barley linking DArT markers to SSR, RFLP and STS loci and agricultural traits BMC Genomics 7:206.
Remark
Number of populations contributing to the placement of Bmac216 in the Barley, Consensus 2006 DArT maps = 1
Possible Orthologs
Bmac0216



Probe
Bmac216
Locus
Bmac0216
Bmac216
Synonym
Other nameBmac0216
Reference
ReferenceRamsay L et al. (2000) A simple sequence repeat-based linkage map of barley Genetics 156:1997-2005.
Remarks
Insert contains repeat (AC)5
Quality = 4: Ladders of bands that are at equal intensity, but may contain scoreable weak products
Type
PCR
SSR
PCR primers
5' GTACTATTCTTTGCTTGGGC 3'
5' ATACACATGTGCAAAACCATA 3'
SSR size
190
Amplification Conditions
1 cycle of 1 min @ 94C, 1 min @ 55C, 1 min @ 72C, 30 cycles of 1 min @ 94C, 1 min @ 55C, 1 min @ 72C, 1 cycle of 5 mins @ 72C.
Source Species
Hordeum vulgare