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GrainGenes Marker Report: Bmac224

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Locus
Bmac224
Type
Microsatellite
Synonym
SynonymBmac0224
Chromosome
7H
Map
Hordeum-Consensus2006-DArT-7H87.4
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Map Data
Barley, Consensus 2006, DArT
Probe
Bmac224
Reference
ReferenceWenzl P et al. (2006) A high-density consensus map of barley linking DArT markers to SSR, RFLP and STS loci and agricultural traits BMC Genomics 7:206.
Remark
Number of populations contributing to the placement of Bmac224 in the Barley, Consensus 2006 DArT maps = 1
Possible Orthologs
Bmac0224



Probe
Bmac224
Locus
Bmac0224
Bmac224
Synonym
Other nameBmac0224
Reference
ReferenceRamsay L et al. (2000) A simple sequence repeat-based linkage map of barley Genetics 156:1997-2005.
Remarks
Insert contains repeat (AC)5/(AC)5
Quality = 2: Single product, relatively strong stutter bands
Diversity Index (DI) = 0.2
Type
PCR
SSR
PCR primers
5' GCATATATACCACCCTTGGT 3'
5' ATTCTTGATGGCTATAGCTTG 3'
SSR size
166
Amplification Conditions
1 cycle of 1 min @ 94C, 1 min @ 55C, 1 min @ 72C, 30 cycles of 1 min @ 94C, 1 min @ 55C, 1 min @ 72C, 1 cycle of 5 mins @ 72C.
Source Species
Hordeum vulgare