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GrainGenes Marker Report: Bmag9

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Locus	Bmag9
Type	Microsatellite
Synonym	Synonym Bmag0009
Chromosome	6H
Map	Barley-consensus-2003-6H 23.8 Hv-Consensus2006-Marcel-6H 62.21
	[ Show Nearby Loci ]
Map Data	Barley consensus 2003 Barley, Consensus 2006, Marcel
Probe	Bmag9
Data Source	Langridge, Peter J.
Remark	Loci in 'Barley, Consensus 2006, Marcel' mapped in population(s) : L94 x Vada; Oregon Wolfe Dom x Rec; Steptoe x Morex; Cebada Capa x SusPtrit
Possible Orthologs	Bmag0009 Bmag9a Bmag9b
Probe	Bmag9
Locus	Bmag0009 Bmag9 Bmag9a Bmag9b
Synonym	Other name Bmag0009
Reference	Ramsay L et al. (2000) A simple sequence repeat-based linkage map of barley Genetics 156:1997-2005.
Remarks	Insert contains repeat (AG)13 Quality = 2: Single product, relatively strong stutter bands Diversity Index (DI) = 0.59
Type	PCR SSR
PCR primers	5' AAGTGAAGCAAGCAAACAAACA 3' 5' ATCCTTCCATATTTTGATTAGGCA 3'
SSR size	172
Amplification Conditions	1 cycle of 3 min @ 94C, 1 min @ 58C, 1 min @ 72C, 30 cycles of 30 secs @ 94C, 30 secs @ 58C, 30 secs @ 72C, 1 cycle of 5 mins @ 72C.
Source Species	Hordeum vulgare