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GrainGenes Marker Report: CDO1328

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Locus
CDO1328
Type
RFLP
Synonym
Other namecdo1328
Chromosome
2A
2B
2D
Chromosome Arm
2AL
2DL?
Map
Hordeum-Bins-2H71
[ Show all 7 ]
[ Show Nearby Loci ]
Map Data
Barley, BinMap 2005
[ Show all 8 ]
Species
Avena sativa
Probe
CDO1328
Homology
BAB02685.1e-value: 3e-27(AB018114) gb|AAD14522.1~gene_id:MGF10.2~similar to unknown protein [Arabidopsis thaliana]
BAB02685.1e-value: 8e-41(AB018114) gb|AAD14522.1~gene_id:MGF10.2~similar to unknown protein [Arabidopsis thaliana]
Data Source
Kleinhofs, Andris
Remark
This marker is a Binlocus in the Hordeum-Bins maps, i.e. a marker mapped in other crosses and located to the Steptoe x Morex bin
Marker placement value = 2.70 cM on map Oat-KxO/2003-7_10_28
Marker is not a framework marker on map Oat-KxO/2003-7_10_28
Possible Orthologs
CDO1328b
Xcdo1328
Xcdo1328b
cdo1328



Probe
CDO1328
Locus
CDO1328b
Xcdo1328
CDO1328
Xcdo1328b
cdo1328
Synonym
SynonymHAR35_4885
Reference
ReferenceHeun M et al. (1991) Construction of a restriction fragment length polymorphism map for barley (Hordeum vulgare) Genome 34:437-447.
Remarks
Uni-ZAP XR library
OatUni-ZAPXR [c]
Type
cDNA
Sequence
BE439066
[ Show all 7 ]
Polymorphism
CDO1328 EcoRI
Linkage Group
2L
Insert Enzyme
EcoRI
XhoI
Source Species
Avena sativa
Source Germplasm
Brooks (oat)
Source Tissue
etiolated leaf
Insert Size
1.1
PCR size
1.1