GrainGenes Marker Report: CDO1380
Locus
cdo1380
Type
RFLP
Synonym
Synonym CDO1380a CDO1380b
Chromosome
6A 6B 6D
Chromosome Arm
6AL 6BL 6DL
Map
Oat-2003-OglexMAM17-5_3 39 Oat-2004-OxM-QTL4_3 45.6 Oat-KxO/2003-36 0 RGA-2013_KO36 0 Rice-CU-2 81.1
[ Show Nearby Loci ]
Map Data
Oat, KxO, 2003
[ Show all 7 ]
Probe
CDO1380
Homology
CAC05452.1 e-value: 1e-17 (AL391712) putative protein [Arabidopsis thaliana]
Remark
Marker placement value = 0.00 cM on map Oat-KxO/2003-36 Marker is a framework marker on map Oat-KxO/2003-36
Possible Orthologs
CDO1380a
[ Show all 8 ]
Probe
CDO1380
Locus
CDO1380a
[ Show all 20 ]
Synonym
Other name CD1380 Synonym HAR35_17894
Reference
Heun M et al. (1991) Construction of a restriction fragment length polymorphism map for barley (Hordeum vulgare) Genome 34:437-447.
Remarks
Uni-ZAP XR library OatUni-ZAPXR [c]
Type
cDNA
Sequence
BE439201 CDO1380_WHE03D03.r1 AA231833 AA231886
Polymorphism
CDO1380 EcoRI CDO1380 DraI
Linkage Group
6L
Insert Enzyme
EcoRI XhoI
Source Species
Avena sativa
Source Germplasm
Brooks (oat)
Source Tissue
etiolated leaf
Insert Size
1.2
PCR size
1.2
GrainGenes Marker Report: CDO1380
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