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GrainGenes Marker Report: CDO1400

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Locus
CDO1400
Type
RFLP
Chromosome
2B
4A
7D
7H
Chromosome Arm
2BS
4AS
4AS2BS
4AS7BS?2BS?
Map
Barley-consensus-2003-7H16.7
Hordeum-CxH-7H14.96
[ Show Nearby Loci ]
Map Data
Barley consensus 2003
Barley, CxH
Wheat chromosome arm map
Probe
CDO1400
Homology
AF192975_1e-value: 1e-04(AF192975) unknown [Oryza sativa]
BAB09169.1e-value: 4e-20(AB018113) gene_id:MFC19.8~pir||T05524~similar to unknown protein [Arabidopsis thaliana]
Data Source
Langridge, Peter J.
Possible Orthologs
CDO1400B
CDO1400C
CDO1400D
Xcdo1400
Xcdo1400-7D



Probe
CDO1400
Locus
Xcdo1400-7D
[ Show all 8 ]
Synonym
SynonymHAR35_1490
HAR35_43149
Reference
ReferenceHeun M et al. (1991) Construction of a restriction fragment length polymorphism map for barley (Hordeum vulgare) Genome 34:437-447.
Remarks
Uni-ZAP XR library
OatUni-ZAPXR [c]
Type
cDNA
Sequence
BE439180
BE439249
CDO1400_WHE03D10.r1
CDO1400_WHE03D10.s1
Linkage Group
2S,4,4S,5L,6
7L7S
Insert Enzyme
EcoRI
XhoI
Source Species
Avena sativa
Source Germplasm
Brooks (oat)
Source Tissue
etiolated leaf
Insert Size
1.4
PCR size
1.4