Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Marker Report: CDO1406

[Submit comment/correction]

Locus	CDO1406
Type	RFLP
Synonym	Synonym POPA1_0047
Chromosome	3A 3B 3D 3H 4H
Chromosome Arm	3ABL 3AL 3BL 3DL
Map	Barley-consensus-2003-4H 58 [ Show all 7 ]
	[ Show Nearby Loci ]
Map Data	Barley consensus 2003 [ Show all 9 ]
Probe	CDO1406
Data Source	Kleinhofs, Andris Langridge, Peter J.
Remark	This marker is a Binlocus in the Hordeum-Bins maps, i.e. a marker mapped in other crosses and located to the Steptoe x Morex bin Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb' Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = Igri x Franka Loci in 'Barley, Consensus 2006, Marcel' mapped in population(s) : Igri x Franka
Possible Orthologs	Xcdo1406 Xcdo1406-3 Xcdo1406-3D
Probe	CDO1406
Locus	Xcdo1406-3 Xcdo1406-3D CDO1406 Xcdo1406
Synonym	Synonym HAR35_14619 HAR35_50370
Reference	Heun M et al. (1991) Construction of a restriction fragment length polymorphism map for barley (Hordeum vulgare) Genome 34:437-447.
Remarks	Uni-ZAP XR library OatUni-ZAPXR [c] OatUni-ZAPXR
Type	cDNA
Sequence	BQ548080 CDO1406-5
Polymorphism	CDO1406 EcoRI Durums CDO1406 EcoRI CDO1406 XbaI
Linkage Group	3L
Insert Enzyme	EcoRI XhoI
Source Species	Avena sativa
Source Germplasm	Brooks (oat)
Source Tissue	etiolated leaf
Insert Size	0.6
PCR size	0.6