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GrainGenes Marker Report: CDO370

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Locus	CDO370
Type	RFLP
Synonym	Other name cdo370 Synonym POPA1_0883
Chromosome	2H
Chromosome Arm	2HS
Map	Barley-consensus-2003-2H 69.4 [ Show all 13 ]
	[ Show Nearby Loci ]
QTL with Locus Marker	QBosl.ClSa-2H
Map Data	Barley consensus [ Show all 13 ]
Species	Avena sativa Avena sativa L.
Probe	CDO370
Homology	RS8_ORYSA e-value: 2e-27 40S RIBOSOMAL PROTEIN S8
Reference	Wenzl P et al. (2006) A high-density consensus map of barley linking DArT markers to SSR, RFLP and STS loci and agricultural traits BMC Genomics 7:206.
Data Source	Kleinhofs, Andris Langridge, Peter J.
Remark	Number of populations contributing to the placement of CDO370 in the Barley, Consensus 2006 DArT maps = 1 This marker is a Binlocus in the Hordeum-Bins maps, i.e. a marker mapped in other crosses and located to the Steptoe x Morex bin Marker placement value = 2.94 cM on map Oat-KxO/2003-5 Marker is not a framework marker on map Oat-KxO/2003-5
Possible Orthologs	Xcdo370 Xcdo370-2 Xcdo370-2B Xcnl.CDO370 cdo370
Probe	CDO370
Locus	Xcdo370-2 [ Show all 6 ]
Synonym	Synonym HAR35_14503 HAR35_14504 HAR35_29816
External Databases	DDBJ EMBL GenBank
Reference	Heun M et al. (1991) Construction of a restriction fragment length polymorphism map for barley (Hordeum vulgare) Genome 34:437-447.
Remarks	Uni-ZAP XR library OatUni-ZAPXR [c] OatUni-ZAPXR
Type	cDNA STS
PCR primers	GCT CTC CGC CTG GAT ACA GC CCC TTG CCC TTC TTC TTC TG
Sequence	BE439107 CDO370_WHE2E0051 CDO370_WHE2E0052 CDO370
Polymorphism	CDO370 EcoRI CDO370 EcoRV CDO370 DraI
Linkage Group	[b 2LS]
Insert Enzyme	EcoRI XhoI
Source Species	Avena sativa
Source Germplasm	Brooks (oat)
Source Tissue	etiolated leaf
Insert Size	1
PCR size	1