GrainGenes Marker Report: CDO507
Locus
CDO507
Type
RFLP
Synonym
Synonym CDO507
Chromosome
6H
Map
Hordeum-Bins-6H 78.6 Hordeum-Consensus2005-SNP-6H 82.076 Hordeum-QTLConsensus-Abiotic-6H 82.08 Hordeum-QTLConsensus-Agronomic-6H 82.08 Hordeum-StMo-SNP-6H 73.25
[ Show Nearby Loci ]
Map Data
Barley, Abiotic QTL Consensus Barley, Agronomic QTL Consensus Barley, BinMap 2005 Barley, Consensus 2005, SNP Barley, Steptoe x Morex, SNP
Probe
CDO507
Homology
AAH07166 e-value: 6.9 (BC007166) Similar to erythrocyte protein band 4.1-like 4 [Mus musculus] AF169631_1 e-value: 1.3 (AF169631) prostate stromal protein ps20 [Homo sapiens] AAB17090.1 e-value: 6.1 (U71440) polyprotein [Rice tungro spherical virus]
Reference
Rostoks N et al. (2005) Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Molecular Genetics and Genomics 274:515-527.
Possible Orthologs
CDO507a
[ Show all 9 ]
Probe
CDO507
Locus
CDO507a
[ Show all 11 ]
Synonym
Synonym HAR35_14437 HAR35_38536 HAR35_47154
Related Probe
RZ273
Hybridization_homologue: The two clones were isolated independently but exhibit the same RFLP patterns when hybridized to DNA from test genotypes, and thus are closely related in sequence.
Reference
Heun M et al. (1991) Construction of a restriction fragment length polymorphism map for barley (Hordeum vulgare) Genome 34:437-447.
Remarks
Uni-ZAP XR library
Type
cDNA
Sequence
BE439279
[ Show all 11 ]
Polymorphism
CDO507 EcoRI CDO507 EcoRV CDO507 HindIII CDO507 DraI CDO507 XbaI
Source Species
Avena sativa
Source Germplasm
Brooks (oat)
Source Tissue
etiolated leaf
PCR size
2
GrainGenes Marker Report: CDO507
|
| |||||||||||
|
| |||||||||||
|
| |||||||||||
|
| |||||||||||
|
| |||||||||||
| ||||||||||||
|
| |||||||||||
|
| |||||||||||
|
| |||||||||||
|
| |||||||||||
|
| |||||||||||
|
| |||||||||||
|
| |||||||||||
|
| |||||||||||
|
| |||||||||||
| ||||||||||||
|
| |||||||||||
|
| |||||||||||
|
| |||||||||||
|
| |||||||||||
|
| |||||||||||
|
| |||||||||||
|
| |||||||||||
|
| |||||||||||
|
|