GrainGenes Marker Report: CDO580
Locus
CDO580
Type
RFLP
Synonym
Other name cdo580
Chromosome
1A 1B 1D 1H
Chromosome Arm
1AS 1BS 1DS 1HL
Map
1D.1R recombinants 25.5
[ Show all 13 ]
[ Show Nearby Loci ]
Rearrangement
In segment 82-180
[ Show all 6 ]
Map Data
Barley consensus
[ Show all 14 ]
Species
Avena sativa
Probe
CDO580
Homology
T47470 e-value: 1e-33 isovaleryl-CoA-dehydrogenase precursor (IVD) - Arabidopsis thaliana [Arabidopsis thaliana]
Reference
Mesfin A et al. (2003) Quantitative trait loci for fusarium head blight resistance in barley detected in a two-rowed by six-rowed population Crop Science 43:307-318.
Remark
Marker placement value = 0.00 cM on map Oat-KxO/2003-4_12 Marker is a framework marker on map Oat-KxO/2003-4_12
Possible Orthologs
CDO580(A)
[ Show all 13 ]
Probe
CDO580
Locus
CDO580
[ Show all 19 ]
Synonym
Synonym HAR35_15747 HAR35_15748 HAR35_38596
Reference
Heun M et al. (1991) Construction of a restriction fragment length polymorphism map for barley (Hordeum vulgare) Genome 34:437-447.
Remarks
Uni-ZAP XR library OatUni-ZAPXR [c]
Type
cDNA
Sequence
BE439190
[ Show all 6 ]
Polymorphism
CDO580 EcoRV CDO580 XbaI
Linkage Group
1S
Insert Enzyme
EcoRI XhoI
Source Species
Avena sativa
Source Germplasm
Brooks (oat)
Source Tissue
etiolated leaf
Insert Size
1.3
PCR size
1.3
GrainGenes Marker Report: CDO580
|
| ||||||||
|
| ||||||||
|
| ||||||||
|
| ||||||||
|
| ||||||||
|
| ||||||||
| |||||||||
|
| ||||||||
|
| ||||||||
|
| ||||||||
|
| ||||||||
|
| ||||||||
|
| ||||||||
|
| ||||||||
|
| ||||||||
|
| ||||||||
|
| ||||||||
|
| ||||||||
|
| ||||||||
|
| ||||||||
|
| ||||||||
|
| ||||||||
|
| ||||||||
|
| ||||||||
|
| ||||||||
|
| ||||||||
|
| ||||||||
|
| ||||||||
|
| ||||||||
|
|