Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Marker Report: CDO595

[Submit comment/correction]

Locus	CDO595
Type	RFLP
Synonym	Other name cdo595
Chromosome	7A 7B 7D 7H
Chromosome Arm	7AS 7BS 7HL
Map	Barley-consensus-2003-7H 82 [ Show all 19 ]
	[ Show Nearby Loci ]
Map Data	Barley consensus [ Show all 20 ]
Species	Avena sativa
Probe	CDO595
Homology	AAC24792.1 e-value: 2.7 (AF042016) olfactory receptor [Sus scrofa] H82529 e-value: 2.2 hypothetical protein XF2656 [imported] - Xylella fastidiosa (strain 9a5c)
Data Source	Kleinhofs, Andris Langridge, Peter J.
Remark	This marker is a Binlocus in the Hordeum-Bins maps, i.e. a marker mapped in other crosses and located to the Steptoe x Morex bin Marker placement value = 6.13 cM on map Oat-KxO/2003-6 Marker is not a framework marker on map Oat-KxO/2003-6
Possible Orthologs	Xcdo595 Xcdo595-7A Xcnl.CDO595 cdo595
Probe	CDO595
Locus	CDO595 Xcdo595 Xcdo595-7A Xcnl.CDO595 cdo595
Related Probe	BCD1066
	Hybridization_homologue: The two clones were isolated independently but exhibit the same RFLP patterns when hybridized to DNA from test genotypes, and thus are closely related in sequence.
Reference	Heun M et al. (1991) Construction of a restriction fragment length polymorphism map for barley (Hordeum vulgare) Genome 34:437-447.
Remarks	Uni-ZAP XR library OatUni-ZAPXR [c]
Type	cDNA
Sequence	BE439146 [ Show all 8 ]
Polymorphism	CDO595 EcoRI CDO595 HindIII
Linkage Group	7S [b 1S]
Insert Enzyme	EcoRI XhoI
Source Species	Avena sativa
Source Germplasm	Brooks (oat)
Source Tissue	etiolated leaf
Insert Size	1.5
PCR size	1.5