Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Marker Report: CDO684

[Submit comment/correction]

Locus	CDO684
Type	RFLP
Chromosome	2A 2B 2D 3H
Chromosome Arm	2AL 2DL 3HL
Map	Barley-Consensus-3H 3.9 Barley-Consensus2-3H 39.6 Hordeum-Bins-3H 67
	[ Show Nearby Loci ]
Map Data	Barley consensus Barley consensus 2 Barley, BinMap 2005 Wheat chromosome arm map
Probe	CDO684
Homology	T04211 e-value: 0.005 probable threonine dehydratase (EC 4.2.1.16) T5C23.70 [similarity] - Arabidopsis thaliana NP_001208.2 e-value: 4.2 carbonic anhydrase XI precursor; carbonic anhydrase-related protein 2; carbonic anhydrase-related protein XI [Homo sapiens] (CA-XI) (CARBONIC ANHYDRASE-RELATED PROTEIN 11) (CARP XI)
Data Source	Kleinhofs, Andris
Remark	This marker is a Binlocus in the Hordeum-Bins maps, i.e. a marker mapped in other crosses and located to the Steptoe x Morex bin
Possible Orthologs	Xcdo684 Xcdo684-2B Xcnl.CDO684 cdo684
Probe	CDO684
Locus	CDO684 Xcdo684-2B Xcnl.CDO684 Xcdo684 cdo684
Synonym	Synonym HAR35_19662
Reference	Heun M et al. (1991) Construction of a restriction fragment length polymorphism map for barley (Hordeum vulgare) Genome 34:437-447.
Remarks	Uni-ZAP XR library OatUni-ZAPXR [c]
Type	cDNA
Sequence	BE439148 BE439216 CDO684_WHE03B05.r1 CDO684_WHE03B05.s1
Polymorphism	CDO684 EcoRV
Linkage Group	3S,2L [b Gr3]
Insert Enzyme	EcoRI XhoI
Source Species	Avena sativa
Source Germplasm	Brooks (oat)
Source Tissue	etiolated leaf
Insert Size	1.9 2.1
PCR size	2.1