GrainGenes Marker Report: CDO949
Locus
cdo949
Type
RFLP
Map
Oat-2002-OxT-QTL_32 95.5 Oat-KxO/2003-5 15.4 Oat-OxT-32 101.9 Wheat, Yr genes and QTL 4D 77.3
[ Show Nearby Loci ]
Map Data
Oat, KxO, 2003 Oat, OxT Oat-2002-OxT-QTL Wheat, Yr genes and QTL
Probe
CDO949
Homology
S32671 e-value: 7e-08 alanine--tRNA ligase (EC 6.1.1.7) - Arabidopsis thaliana (fragment) CAA73145.1 e-value: 6e-22 (Y12555) alanyl t-RNA synthetase [Arabidopsis thaliana]
Remark
Marker placement value = 3.03 cM on map Oat-KxO/2003-5 Marker is not a framework marker on map Oat-KxO/2003-5
Possible Orthologs
CDO949a
[ Show all 8 ]
Probe
CDO949
Locus
Xcdo949-4D
[ Show all 9 ]
Reference
Heun M et al. (1991) Construction of a restriction fragment length polymorphism map for barley (Hordeum vulgare) Genome 34:437-447.
Remarks
Uni-ZAP XR library
Type
cDNA
Sequence
BE439311 BE439344 CDO949_WHE05E05.s1
Polymorphism
CDO949 DraI CDO949 XbaI CDO949 EcoRI CDO949 EcoRV
Source Species
Avena sativa
Source Germplasm
Brooks (oat)
Source Tissue
etiolated leaf
PCR size
1.1
GrainGenes Marker Report: CDO949
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