Query (optional)   in Class  

GrainGenes Marker Report: GBS0855-5H

[Submit comment/correction]

Locus
GBS0855-5H
Type
SNP
Map
Hv-Consensus2006-Stein-5H123.5
Hv-DxR-Stein-5H143.97
[ Show Nearby Loci ]
Map Data
Barley, Consensus 2006, Stein
Barley, OWB, Stein2006
Probe
GBS855



Probe for Locus
GBS855
Locus
GBS0855
GBS0855-5H
Reference
ReferenceStein N et al. (2007) A 1000 loci transcript map of the barley genome - new anchoring points for integrative grass genomics Theoretical and Applied Genetics 114:823-839.
General Remarks
Clone HT14I11r
PCR primers
GGATTTCAGTTTGCCACGAA
GAAAATCCAATGCTCTCGGC
Amplification Conditions
5 min at 94 deg C; 50 cycles with 30 sec at 94 deg C, 1 min at 65 deg C (touchdown of 1 deg C / cycle for initial 10 cycles - final annealing of 55 deg C for remaining 40 cycles), 1 min at 72 deg C; and a final extension step of 5 min at 72 deg C
Sequence
CA015509
DNA Library
IPK-HT
Source Species
Hordeum vulgare
Source Germplasm
Barke (barley)