Query (optional)   in Class  

GrainGenes Marker Report: Glu-1

[Submit comment/correction]

Gene
glu-1
Gene Product
licheninase
Sequence
AM181305
AM181305_1.cds



Locus
Glu-1
Type
Gene
Chromosome
1A
1B
1D
1R
Chromosome Arm
1AL
1BL
1DL
1RL
Map
Secale-Devos-1R3.1
Secale-DxR-RAPD-1R78.2
Ta-Gale-1A25.6
Ta-Gale-1B25.6
Ta-Gale-1D25.6
[ Show Nearby Loci ]
Map Data
Rye, Ds2 x RxL10
Rye, Ds2 x RxL10, RAPD
Wheat, Gale
Associated Gene
Glu-A1 (Triticum)
Glu-B1 (Triticum)
Glu-D1 (Triticum)
Glu-R1 (Secale)
Gene Class
Glutenins
Possible Orthologs
Glu-A1
[ Show all 17 ]



Gene Associated with Locus
Glu-A1 (Triticum)
Synonym
Other nameGlt-A1
ReferenceGalili G and Feldman M (1983) Genetic control of endosperm proteins in wheat 2. Variation in high-molecular-weight glutenin and gliadin subunits of Triticum aestivum. Theoretical and Applied Genetics 66:77-86.
Glt-A2
ReferenceGalili G and Feldman M (1983) Genetic control of endosperm proteins in wheat 2. Variation in high-molecular-weight glutenin and gliadin subunits of Triticum aestivum. Theoretical and Applied Genetics 66:77-86.
Glu 1A
ReferenceSozinov Aa (1984) Blocks of cereal storage proteins as genetic markers. Proceedings of the 2nd International Workshop on Gluten Proteins, Wageningen, The Netherlands 121-127.
SynonymGlu-A1
Gene Class
Glutenins
Orthologous Gene Set
Glu-1
Allele
Glu-A1a (Triticum)
[ Show all 19 ]
Locus
Glu-1
Glu-A1
GluA-1A
XGlu1
Candidate Locus
TraesCS1A02G317311.1
XGlu1
Xpsr12(Glu-1)-1A
Reference
ReferenceCheng S et al. (2024) Harnessing Landrace Diversity Empowers Wheat Breeding for Climate Resilience Nature.
[ Show all 18 ]
URL
Gene record from the Cataloge of Gene Symbols for Wheat at Komugi
Molecular markers for glutenins at MASWheat
Chromosome
1A
ReferenceLawrence GJ and Shepherd KW (1980) Variation in glutenin protein subunits in wheat. Australian Journal of Biological Sciences 33:221-233.
Chromosome Arm
1AL
ReferenceLawrence GJ and Shepherd KW (1981) Chromosomal locations of genes controlling seed proteins in species related to wheat. Theoretical and Applied Genetics 59:25-31.
ReferencePayne PI et al. (1982) Structural and genetical studies on the high-molecular-weight subunits of wheat glutenin III. Telocentric mapping of the subunit genes on the long arms of the homoeologous group 1 chromosomes. Theoretical and Applied Genetics 63:129-138.
Germplasm
Hexaploid stockChinese Spring
ReferenceLawrence GJ and Shepherd KW (1981) Chromosomal locations of genes controlling seed proteins in species related to wheat. Theoretical and Applied Genetics 59:25-31.
Chinese Spring
ReferenceLawrence GJ and Shepherd KW (1980) Variation in glutenin protein subunits in wheat. Australian Journal of Biological Sciences 33:221-233.
Homologous chromosome substitution lineChinese Spring/Hope 1A
ReferencePayne PI et al. (1982) Structural and genetical studies on the high-molecular-weight subunits of wheat glutenin III. Telocentric mapping of the subunit genes on the long arms of the homoeologous group 1 chromosomes. Theoretical and Applied Genetics 63:129-138.
Comment
No 'y-type' proteins from the Glu-A1 locus have been demonstrated in hexaploid wheat (790), although they are found in diploid wheats (1126, 579), and sequencing experiments have shown the presence of a terminating sequence inside the transcribed portion of the gene (255). The gene coding for 'x-type' proteins within Glu-A1 is also often silent (790, 290).
There is a possibility that Glu-A1 alleles i, j (1116) and k (327) correspond to alleles d, e, f or g that were published shortly earlier (1126). Glu-A1m (1120) has been changed to n, because the m allele in 754 has precedence. Allele n (1120) has been changed to o. An earlier reference to an allele designated Glu-A1d (1014) has been withdrawn (787). There appears to be a minor band associated with subunit 2* encoded by Glu-A1b (1109); this may be the same as a band named A5 in 290. Six combinations involving 5 HMW subunits [1A (u-z)] are listed in 290, from a study of 109 genotypes including representatives of botanical varieties. A number of alleles in T. turgidum var. dicoccoides populations were described, 12 at Glu-A1-1 and 3 at Glu-A1-2 (579).
Hexaploid stocks: various accessions in addition to Chinese Spring (290).
See the Catalogue of Gene Symbols for Wheat for a full description of alleles
Clone
GLU Ax
Glu-Ax1/x2*_SNP
Glu-Ax2_IND
TraesCS1A02G317311
Sequence
TraesCS1A02G317311.1
Wheat Gene Catalog Reference
754
ReferenceNg PKW et al. (1989) Glu-1 allele compositions of the wheat cultivars registered in Canada. Journal of Genetics and Breeding 43:53-59.
[ Show all 11 ]
Info Source
ReferenceMcIntosh RA et al. (1995) Catalogue of gene symbols for wheat. Proceedings of the 8th International Wheat Genetics Symposium 1333-1500.
Data Curator
Hart, Gary E.95.08.24



Gene Associated with Locus
Glu-B1 (Triticum)
Synonym
Other nameGlt-B1
ReferenceGalili G and Feldman M (1983) Genetic control of endosperm proteins in wheat 2. Variation in high-molecular-weight glutenin and gliadin subunits of Triticum aestivum. Theoretical and Applied Genetics 66:77-86.
Glt-B2
ReferenceGalili G and Feldman M (1983) Genetic control of endosperm proteins in wheat 2. Variation in high-molecular-weight glutenin and gliadin subunits of Triticum aestivum. Theoretical and Applied Genetics 66:77-86.
Glt-B3
ReferenceGalili G and Feldman M (1983) Genetic control of endosperm proteins in wheat 2. Variation in high-molecular-weight glutenin and gliadin subunits of Triticum aestivum. Theoretical and Applied Genetics 66:77-86.
Glu 1B
ReferenceSozinov Aa (1984) Blocks of cereal storage proteins as genetic markers. Proceedings of the 2nd International Workshop on Gluten Proteins, Wageningen, The Netherlands 121-127.
Gene Class
Glutenins
Orthologous Gene Set
Glu-1
Allele
Glu-B1-1d (Triticum)
[ Show all 48 ]
Locus
Glu-1
[ Show all 6 ]
Candidate Locus
Xpsr12(Glu-1)-1B
Reference
ReferenceLukow OM et al. (1989) The HMW glutenin subunit composition of Canadian wheat cultivars and their association with bread-making quality. Journal of Science Food and Agriculture 46:451-460.
[ Show all 17 ]
URL
Molecular markers for glutenins at MASWheat
Gene record in the Catalog of Gene Symbols for Wheat at Komugi
Chromosome
1B
ReferenceBietz JA et al. (1975) Cereal single-kernel analysis of glutenin: Use in wheat genetics and breeding. Cereal Chemistry 52:513-532.
ReferenceLawrence GJ and Shepherd KW (1980) Variation in glutenin protein subunits in wheat. Australian Journal of Biological Sciences 33:221-233.
ReferencePayne PI et al. (1982) Structural and genetical studies on the high-molecular-weight subunits of wheat glutenin III. Telocentric mapping of the subunit genes on the long arms of the homoeologous group 1 chromosomes. Theoretical and Applied Genetics 63:129-138.
Chromosome Arm
1BL
ReferenceBietz JA et al. (1975) Cereal single-kernel analysis of glutenin: Use in wheat genetics and breeding. Cereal Chemistry 52:513-532.
ReferenceLawrence GJ and Shepherd KW (1980) Variation in glutenin protein subunits in wheat. Australian Journal of Biological Sciences 33:221-233.
ReferencePayne PI et al. (1982) Structural and genetical studies on the high-molecular-weight subunits of wheat glutenin III. Telocentric mapping of the subunit genes on the long arms of the homoeologous group 1 chromosomes. Theoretical and Applied Genetics 63:129-138.
Germplasm
Hexaploid stockChinese Spring
Comment
Alleles formerly designated t to x in 939 have been renamed x to ab because allele t in 617 and alleles u, v and w in 754 have precedence. Subunit 8 of Glu-B1b (7+8) is more acidic in isoelectric focusing than subunit 8 of Glu-B1d (6+8) (394). Variation in the mobility of subunits designated 7 has been observed (790), which accords with more recent observations (516, 754). The subunit encoded by Glu-B1v (754) has the same mobility as subunit 7 of Glu-B1c (7+9); it could be the same subunit as 7' encoded by Glu-B1ai (516). Variation in the staining intensity of subunit 7 in different varieties has also been observed (754); possible low gene expression at Glu-B1 has been noted for Glu-B1w, where subunits 6*+8* stain very faintly (814). One of the Glu-B1af subunits has been numbered 26 in 814; 26 was previously used to number the subunit encoded by Glu-A1k (327). Subunit 28 of Glu-B1ag (28+29) (814) is referred to as subunit 19* in 753. Subunit 23 of Glu-B1p (23+18) and Glu-B1ad (23+22) (95) may not be the same subunit as that numbered 23 of Glu-B1l (23+24) (561). Glu-B1z carried by Roccia was numbered 7+15 and named Glu-B1-XII in 95; however, the earlier name, Glu-B1-IX (1117), has precedence. Also, 1117 states that the Glu-B1-IX subunit of faster mobility is slightly slower than subunit 15. Subunit 11 of Glu-B1s (7+11) was so numbered in 327 because its mobility is the same as one of the subunits encoded by a Glu-D1 allele (2+11) described in 545.
Fifteen combinations involving 12 HMW subunits [1B (a-o)] are listed in 290. Eight alleles at Glu-B1-1 and 10 alleles at Glu-B1-2 were described in T. turgidum var. dicoccoides populations (579).
See the Catalogue of Gene Symbols for Wheat for a full description of alleles
Clone
GLU Bx
Wheat Gene Catalog Reference
617
ReferenceLukow OM et al. (1989) The HMW glutenin subunit composition of Canadian wheat cultivars and their association with bread-making quality. Journal of Science Food and Agriculture 46:451-460.
[ Show all 14 ]
Info Source
ReferenceMcIntosh RA et al. (1995) Catalogue of gene symbols for wheat. Proceedings of the 8th International Wheat Genetics Symposium 1333-1500.
Data Curator
Hart, Gary E.95.08.24



Gene Associated with Locus
Glu-D1 (Triticum)
Synonym
Other nameGlt-D1
ReferenceGalili G and Feldman M (1983) Genetic control of endosperm proteins in wheat 2. Variation in high-molecular-weight glutenin and gliadin subunits of Triticum aestivum. Theoretical and Applied Genetics 66:77-86.
Glt-D2
ReferenceGalili G and Feldman M (1983) Genetic control of endosperm proteins in wheat 2. Variation in high-molecular-weight glutenin and gliadin subunits of Triticum aestivum. Theoretical and Applied Genetics 66:77-86.
Glu 1D
ReferenceSozinov Aa (1984) Blocks of cereal storage proteins as genetic markers. Proceedings of the 2nd International Workshop on Gluten Proteins, Wageningen, The Netherlands 121-127.
SynonymGlu-D1
Gene Class
Glutenins
Orthologous Gene Set
Glu-1
Allele
Glu-D1a (Triticum)
[ Show all 19 ]
Locus
Glu-1
Glu-D1
GluD-1D
GluD1
XGlu1
Candidate Locus
TraesCS1D02G317211.1
XGlu-1
Xpsr12(Glu-1)-1D
Reference
ReferenceCheng S et al. (2024) Harnessing Landrace Diversity Empowers Wheat Breeding for Climate Resilience Nature.
[ Show all 10 ]
URL
Molecular markers for glutenins at MASWheat
Gene record in the Catalog of Gene Symbols for Wheat at Komugi
Chromosome
1D
ReferenceBietz JA et al. (1975) Cereal single-kernel analysis of glutenin: Use in wheat genetics and breeding. Cereal Chemistry 52:513-532.
[ Show all 6 ]
Chromosome Arm
1DL
ReferenceBietz JA et al. (1975) Cereal single-kernel analysis of glutenin: Use in wheat genetics and breeding. Cereal Chemistry 52:513-532.
ReferenceBrown JWS et al. (1979) Control of endosperm proteins in Triticum aestivum (var. Chinese Spring) and Aegilops umbellulata by homoeologous group 1 chromosomes. Genetics 93:189-200.
ReferenceLawrence GJ and Shepherd KW (1980) Variation in glutenin protein subunits in wheat. Australian Journal of Biological Sciences 33:221-233.
ReferenceOrth RA and Bushuk W (1974) VI. Chromosomal location of genes coding for subunits of glutenin of common wheat. Cereal Chemistry 51:118-126.
ReferencePayne PI et al. (1982) Structural and genetical studies on the high-molecular-weight subunits of wheat glutenin III. Telocentric mapping of the subunit genes on the long arms of the homoeologous group 1 chromosomes. Theoretical and Applied Genetics 63:129-138.
Germplasm
Hexaploid stockChinese Spring
Comment
Glu-D1k (291) appears to have arisen as the result of a deficiency of subunit 12 from Glu-D1a (2+12); subunits 2 and 12 are referred to as D1 and D5 in 291. One of the Glu-D1o subunits has been numbered 13 in 545; 13 was previously used to number a subunit encoded by Glu-B1f (13+16) and Glu-B1g (13+19) (796). Subunit 9 of Glu-D1g (5+9) was so numbered in 327 because its mobility is the same as one of the subunits encoded by Glu-B1c (7+9).
Five combinations involving 6 HMW subunits [1D (p-t)] are listed in 290. Eleven additional Glu-D1 alleles in T. tauschii were described (545).
See the Catalogue of Gene Symbols for Wheat for a full description of alleles
Clone
GLU Dx
GLU Dx5
TraesCS1D02G317211
Sequence
TraesCS1D02G317211.1
Wheat Gene Catalog Reference
545
ReferenceLagudah ES and Halloran GM (1988) Phylogenetic relationships of Triticum taushii the D genome donor of hexaploid wheat 1. Variation in HMW subunits of glutenin and gliadins. Theoretical and Applied Genetics 75:592-598.
327
ReferenceGupta RB and Shepherd KW (1988) Inheritance of novel high-molecular-weight glutenin subunits in the Tunisian bread wheat BT-2288. Genome 30:442-445.
291
ReferenceGalili G and Feldman M (1984) A deficiency of the rapidly migrating high molecular weight glutenin subunit D5 in common wheat. Cereal Research Communications 12:259-261.
796
ReferencePayne PI and Lawrence GJ (1983) Catalogue of alleles for the complex gene loci, Glu-A1, Glu-B1, and Glu-D1 which code for high molecular-weight subunits of glutenin in hexaploid wheat. Cereal Research Communications 11:29-35.
290
ReferenceGalili G and Feldman M (1983) Genetic control of endosperm proteins in wheat 2. Variation in high-molecular-weight glutenin and gliadin subunits of Triticum aestivum. Theoretical and Applied Genetics 66:77-86.
Info Source
ReferenceMcIntosh RA et al. (1995) Catalogue of gene symbols for wheat. Proceedings of the 8th International Wheat Genetics Symposium 1333-1500.
Data Curator
Hart, Gary E.95.08.24



Gene Associated with Locus
Glu-R1 (Secale)
Synonym
SynonymSec 3
ReferenceShewry PR et al. (1985) The chromosomal locations and linkage relationships of the structural genes for the prolamin storage proteins (secalin) of rye. Theoretical and Applied Genetics 69:63-69.
Gene Class
Glutenins
Orthologous Gene Set
Glu-1
Locus
Glu-1
Candidate Locus
XSec3
Reference
ReferenceSingh NK and Shepherd KW (1984) Mapping of the genes controlling high-molecular-weight glutelin subunits of rye on the long arm of chromosome 1R. Genetical Research, Cambridge 44:117-123.
ReferenceLawrence GJ and Shepherd KW (1981) Chromosomal locations of genes controlling seed proteins in species related to wheat. Theoretical and Applied Genetics 59:25-31.
Chromosome
1R
ReferenceLawrence GJ and Shepherd KW (1981) Chromosomal locations of genes controlling seed proteins in species related to wheat. Theoretical and Applied Genetics 59:25-31.
ReferenceShewry PR et al. (1985) The chromosomal locations and linkage relationships of the structural genes for the prolamin storage proteins (secalin) of rye. Theoretical and Applied Genetics 69:63-69.
Chromosome Arm
1RL
ReferenceSingh NK and Shepherd KW (1984) Mapping of the genes controlling high-molecular-weight glutelin subunits of rye on the long arm of chromosome 1R. Genetical Research, Cambridge 44:117-123.
ReferenceShewry PR et al. (1986) Chromosomal locations of the structural gene for secalins in wild perennial rye (Secale montanum Guss.) and cultivated rye (S. cereale L.) determined by two-dimensional electrophoresis. Canadian Journal of Genetics and Cytology 28:76-83.
Germplasm
Alien chromosome addition lineChinese Spring/Imperial 1R
Holdfast/King II 1R
ReferenceShewry PR et al. (1986) Chromosomal locations of the structural gene for secalins in wild perennial rye (Secale montanum Guss.) and cultivated rye (S. cereale L.) determined by two-dimensional electrophoresis. Canadian Journal of Genetics and Cytology 28:76-83.
Translocation lineChinese Spring/Imperial 1DS-1RL
ReferenceSingh NK and Shepherd KW (1984) Mapping of the genes controlling high-molecular-weight glutelin subunits of rye on the long arm of chromosome 1R. Genetical Research, Cambridge 44:117-123.
Info Source
ReferenceMcIntosh RA et al. (1995) Catalogue of gene symbols for wheat. Proceedings of the 8th International Wheat Genetics Symposium 1333-1500.
Data Curator
Hart, Gary E.95.08.24

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.