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GrainGenes Marker Report: Hor2 (Hordeum)

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Gene	Hor2 (Hordeum)
Full Name	B-hordeins
Gene Class	B-Hordein beta-Hordein Hordeins
Locus	HOR-2 Hor2 HorB
Candidate Locus	Hor2
Reference	Forde BG et al. Nucleotide sequence of a B1 hordein gene and the identification of possible upstream regulatory elements in endosperm storage protein genes from barley, wheat and maize Nucleic Acids Research 13:7327-7339.
Gene Product	B hordein
Chromosome	1H
Clone	KV1/KV9 [ Show all 16 ]
Sequence	X03103
Info Source	von Wettstein-Knowles P (1993) Barley (Hordeum vulgare) 2N = 14. Genetic maps: Locus Maps of Complex Genomes.
Locus Associated with Gene	HOR-2
Type	Gene
Chromosome	1H
Map	Hordeum-Heun-1H 4.6
	[ Show Nearby Loci ]
Map Data	Barley, PxN
Probe	Hor2
Associated Gene	Hor2 (Hordeum)
Gene Class	B-Hordein beta-Hordein Hordeins
Possible Orthologs	Hor2
Locus Associated with Gene	Hor2
Type	CAPS Gene RFLP STS
Synonym	Synonym Sex76 (Hordeum)
Chromosome	1H
Chromosome Arm	1HS
Map	Barley-Consensus-1H -34.2 [ Show all 23 ]
	[ Show Nearby Loci ]
In QTL	QAa.HaTR-1H.1 [ Show all 13 ]
Map Data	Barley consensus [ Show all 23 ]
2 Point Data	Hor2/Xris14
Species	Hordeum vulgare
Probe	Hor2 KV1/KV9 pB11
Associated Gene	Hor2 (Hordeum) Sex76 (Hordeum)
Candidate Gene	Hor2 (Hordeum)
Gene Class	B-Hordein beta-Hordein Hordeins
Reference	Rostoks N et al. (2005) Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Molecular Genetics and Genomics 274:515-527. Netsvetaev VP (1997) High lysine mutant of winter barley - L76 Barley Genetics Newsletter 27:51. Kleinhofs A et al. (1993) A molecular, isozyme and morphological map of the barley (Hordeum vulgare) genome Theoretical and Applied Genetics 86:705-712.
Data Source	Blake, Tom 05.04.19
Remark	The Hor2 RFLP/STS is a gene marker for the Sex76 gene. Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb' Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = L9Oregon Wolfe Barleys x Vada,Steptoe x Morex,Igri x Franka,Nure x Tremois Loci in 'Barley, Consensus 2006, Marcel' mapped in population(s) : L94 x Vada; Oregon Wolfe Dom x Rec; Steptoe x Morex; Igri x Franka
Possible Orthologs	HOR-2
Locus Associated with Gene	HorB
Type	Gene
Map	Hordeum-DxM-1H 8.1
	[ Show Nearby Loci ]
Map Data	Barley, Dicktoo x Morex
Associated Gene	Hor2 (Hordeum)
Gene Class	B-Hordein beta-Hordein Hordeins
Locus Candidate for Gene	Hor2
Type	CAPS Gene RFLP STS
Synonym	Synonym Sex76 (Hordeum)
Chromosome	1H
Chromosome Arm	1HS
Map	Barley-Consensus-1H -34.2 [ Show all 23 ]
	[ Show Nearby Loci ]
In QTL	QAa.HaTR-1H.1 [ Show all 13 ]
Map Data	Barley consensus [ Show all 23 ]
2 Point Data	Hor2/Xris14
Species	Hordeum vulgare
Probe	Hor2 KV1/KV9 pB11
Associated Gene	Hor2 (Hordeum) Sex76 (Hordeum)
Candidate Gene	Hor2 (Hordeum)
Gene Class	B-Hordein beta-Hordein Hordeins
Reference	Rostoks N et al. (2005) Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Molecular Genetics and Genomics 274:515-527. Netsvetaev VP (1997) High lysine mutant of winter barley - L76 Barley Genetics Newsletter 27:51. Kleinhofs A et al. (1993) A molecular, isozyme and morphological map of the barley (Hordeum vulgare) genome Theoretical and Applied Genetics 86:705-712.
Data Source	Blake, Tom 05.04.19
Remark	The Hor2 RFLP/STS is a gene marker for the Sex76 gene. Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb' Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = L9Oregon Wolfe Barleys x Vada,Steptoe x Morex,Igri x Franka,Nure x Tremois Loci in 'Barley, Consensus 2006, Marcel' mapped in population(s) : L94 x Vada; Oregon Wolfe Dom x Rec; Steptoe x Morex; Igri x Franka
Possible Orthologs	HOR-2

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