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GrainGenes Marker Report: IWB5841

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Locus	IWB5841
Type	SNP
Synonym	Other name BS00003593 BS00003593_51 Wang S et al. (2014) Characterization of polyploid wheat genomic diversity using a high-density 90 000 single nucleotide polymorphism array. Plant Biotechnology Journal 12:787-796.
Chromosome Arm	6B
Map	Wheat_2014_90KSNP_6B 0.374793
	[ Show Nearby Loci ]
Map Data	Wheat_2014_90KSNP
Species	Triticum aestivum
Probe	BS00003593_51
Reference	Wang S et al. (2014) Characterization of polyploid wheat genomic diversity using a high-density 90 000 single nucleotide polymorphism array. Plant Biotechnology Journal 12:787-796.
Probe	BS00003593_51
Locus	IWB5841 BS00003593 BS00003593_51
Related Probe	AX-95018167 BA00780588
Reference	Wang S et al. (2014) Characterization of polyploid wheat genomic diversity using a high-density 90 000 single nucleotide polymorphism array. Plant Biotechnology Journal 12:787-796. Allen AM et al. (2011) Transcipt-specific, single-nucleotide polymorphism discovery and linkage analysis in hexaploid bread wheat (Triticum aestivum L.) Plant Biotechnology Journal 9:1086-1099.
Type	SNP KASP
PCR primers	FAM 5' CGAGCCTGCGAGGAGCTAC 3' Common 5' ACATACAATACCAGCATCAGCCTGTTTT 3' VIC 5' CCGAGCCTGCGAGGAGCTAT 3' Common 5' ACATACAATACCAGCATCAGCCTGTTTT 3'
Specificity	FAM primer specific to C allele, and VIC primer specific to T allele.
Sequence	BS00003593_51