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GrainGenes Marker Report: IWB5854

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Locus	IWB5854
Type	SNP
Synonym	Other name BS00003632 BS00003632_51 Wang S et al. (2014) Characterization of polyploid wheat genomic diversity using a high-density 90 000 single nucleotide polymorphism array. Plant Biotechnology Journal 12:787-796.
Chromosome Arm	6A
Map	Wheat, Yr genes and QTL 6A 5.5 Wheat_2014_90KSNP_6A 22.0057 Wheat_AB, Mohawk x Cocorit69 6A_1 3.8 Wheat_AB_2015_Consensus-6A 5.9 Wheat_Yr_2021-6A 15.64
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Map Data	Wheat, Yr genes and QTL Wheat, Yr Update, 2021 Wheat_2014_90KSNP Wheat_AB, Mohawk x Cocorit69 Wheat_AB_2015_Consensus
Species	Triticum aestivum
Probe	BS00003632_51
Reference	Wang S et al. (2014) Characterization of polyploid wheat genomic diversity using a high-density 90 000 single nucleotide polymorphism array. Plant Biotechnology Journal 12:787-796.
Probe	BS00003632_51
Locus	IWB5854 BS00003632 BS00003632_51
Reference	Wang S et al. (2014) Characterization of polyploid wheat genomic diversity using a high-density 90 000 single nucleotide polymorphism array. Plant Biotechnology Journal 12:787-796. Allen AM et al. (2011) Transcipt-specific, single-nucleotide polymorphism discovery and linkage analysis in hexaploid bread wheat (Triticum aestivum L.) Plant Biotechnology Journal 9:1086-1099.
Type	SNP KASP
PCR primers	FAM 5' CAACTGGCCCCGACAGCTGT 3' Common 5' CCTCTCCCTTTTTTGCCTCAAGGTA 3' VIC 5' AACTGGCCCCGACAGCTGC 3' Common 5' CCTCTCCCTTTTTTGCCTCAAGGTA 3'
Specificity	FAM primer specific to A allele, and VIC primer specific to G allele.
Sequence	BS00003632_51