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GrainGenes Marker Report: IWB6123

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Locus	IWB6123
Type	SNP
Synonym	Other name BS00009825 BS00009825_51 Wang S et al. (2014) Characterization of polyploid wheat genomic diversity using a high-density 90 000 single nucleotide polymorphism array. Plant Biotechnology Journal 12:787-796.
Chromosome Arm	6B
Map	Wheat_2014_90KSNP_6B 0.374793
	[ Show Nearby Loci ]
QTL with Locus Marker	QArl.UniboDP-6B.2 QTrl.UniboDP-6B.2
Map Data	Wheat_2014_90KSNP
Species	Triticum aestivum
Probe	BS00009825_51
Reference	Wang S et al. (2014) Characterization of polyploid wheat genomic diversity using a high-density 90 000 single nucleotide polymorphism array. Plant Biotechnology Journal 12:787-796.
Possible Orthologs	IWB6123a IWB6123b IWB6123-6B
Probe	BS00009825_51
Locus	IWB6123 [ Show all 6 ]
Related Probe	AX-94494687 BA00626377
Reference	Wang S et al. (2014) Characterization of polyploid wheat genomic diversity using a high-density 90 000 single nucleotide polymorphism array. Plant Biotechnology Journal 12:787-796. Allen AM et al. (2011) Transcipt-specific, single-nucleotide polymorphism discovery and linkage analysis in hexaploid bread wheat (Triticum aestivum L.) Plant Biotechnology Journal 9:1086-1099.
Type	SNP KASP
PCR primers	FAM 5' GGGAGCTGCTCAAGAAGGACAAT 3' Common 5' TGCCCTTGAGCCCGCACATGTA 3' VIC 5' GGAGCTGCTCAAGAAGGACAAC 3' Common 5' TGCCCTTGAGCCCGCACATGTA 3'
Specificity	FAM primer specific to A allele, and VIC primer specific to G allele.
Sequence	BS00009825_51