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GrainGenes Marker Report: MWG2062

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Locus
MWG2062
Type
RFLP
STS
Chromosome
7H
Chromosome Arm
7HL
Map
Barley-Consensus-7H61
[ Show all 10 ]
[ Show Nearby Loci ]
Map Data
Barley consensus
[ Show all 10 ]
Species
Hordeum vulgare
Hordeum vulgare subsp. spontaneum
Probe
MWG2062
Reference
ReferenceSato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
ReferenceVarshney RK et al. (2007) A high density barley microsatellite consensus map with 775 SSR loci. Theoretical and Applied Genetics 114:1091.
Data Source
Kleinhofs, Andris
Remark
This marker is a Binlocus in the Hordeum-Bins maps, i.e. a marker mapped in other crosses and located to the Steptoe x Morex bin
Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb'
Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = Igri x Franka
Loci in 'Barley, Consensus 2006, Marcel' mapped in population(s) : Igri x Franka
Locus in 'Barley, Consensus 2007, SSR' was a BIN marker in 'Barley, Consensus 2006, Marcel'
Possible Orthologs
MWG2062-7H
[ Show all 7 ]



Probe
MWG2062
Locus
MWG2062
[ Show all 8 ]
Synonym
SynonymHAR35_19928
HAR35_48654
Type
Genomic
STS
STS primers
5' TCTCGCTGGTATTCAGGGTCC
5' AAACGATAGCAAGAGGAACCG
STS size
281
Amplification Conditions
STS annealing temperature 60-62 oC
Sequence
AJ234744
AJ234743
MWG2062
MWG2062-5
MWG2062-3
Insert Enzyme
PstI
Source Species
Hordeum vulgare