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GrainGenes Marker Report: MWG634

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Locus
MWG634
Type
CAPS
RFLP
Synonym
SynonymMWG634
Chromosome
4H
Chromosome Arm
4HS
Map
Barley-Consensus-4H-59.1
[ Show all 27 ]
[ Show Nearby Loci ]
QTL with Locus Marker
QSsg.StMo-4H
Map Data
Barley consensus
[ Show all 27 ]
Species
Hordeum vulgare
Probe
MWG634
Reference
ReferenceClose TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
[ Show all 7 ]
Data Source
Blake, Tom05.04.19
Close, Timothy J.
Remark
Number of populations contributing to the placement of MWG634 in the Barley, Consensus 2006 DArT maps = 2
Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb'
Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = Steptoe x Morex,Oregon Wolfe Barleys,Nure x Tremois
Loci in 'Barley, Consensus 2006, Marcel' mapped in population(s) : Steptoe x Morex; Oregon Wolfe Dom x Rec
Locus in 'Barley, Consensus 2007, SSR' was a BIN marker in 'Barley, Consensus 2006, Marcel'
Possible Orthologs
MWG634-4H
[ Show all 16 ]



Probe
MWG634
Locus
Xmwg634.2-4A
[ Show all 17 ]
Reference
ReferenceSayed-Tabatabaei BE et al. (1998) DNA sequencing and primer designing for RFLP clones evenly distributed in the barley genome. Barley Genetics Newsletter 28:15-18.
ReferenceGraner A et al. (1991) Construction of an RFLP map of barley Theoretical and Applied Genetics 83:250-256.
Type
Genomic
STS
STS primers
T7 side (5' to 3') GTGCTGGGTGGATTAAAAAAGAGGG
T3 side (5' to 3') GAACTAAAGATAGGCGGGAGTACTG
Sequence
AJ234549
AJ234548
MWG634
MWG634-5
MWG634-3
Linkage Group
?
Source Species
Hordeum vulgare
Insert Size
0.7